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PDBsum entry 2zkd

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Top Page protein dna_rna ligands Protein-protein interface(s) pores links
Pore analysis for: 2zkd calculated with MOLE 2.0 PDB id
2zkd
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.45 1.46 25.9 -1.23 -0.46 12.7 73 3 1 0 1 1 0 0  DC 1 C DT 2 C DC 12 C DA 4 D DT 5 D DC 6 D 5CM 7
D DG 8 D DG 12 F
2 1.14 1.36 28.3 -1.04 -0.50 10.1 79 3 0 1 1 1 0 0  DT 2 E DA 4 F DT 5 F DC 6 F 5CM 7 F DG 8 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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