spacer
spacer

PDBsum entry 2z2h

Go to PDB code: 
Top Page dna_rna ligands tunnels links
Tunnel analysis for: 2z2h calculated with MOLE 2.0 PDB id
2z2h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
9 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 2.24 4.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  3 DC A,4 DG A,22 DG B,23 DA B,24 DG B
2 1.77 6.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  11 DT A,12 DC A,14 DA B,15 DT B,16 DG B
3 1.77 6.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  11 DT A,12 DC A,13 DG B,14 DA B,15 DT B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer