PDBsum entry 2ywc Go to PDB code:  Pore analysis for: 2ywc calculated with MOLE 2.0 PDB id 2ywc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   17 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.92 2.08 45.6 -1.29 -0.28 25.8 72 6 5 0 5 2 4 0  XMP 701 A 2 1.12 1.44 60.6 -1.85 -0.59 27.1 80 8 9 2 5 1 0 0  MSE 174 A 3 1.14 1.43 64.9 -1.74 -0.59 21.9 77 6 8 2 4 1 3 0  MSE 174 A XMP 701 A 4 1.74 1.90 66.6 -2.50 -0.65 34.6 78 6 6 0 2 0 0 0   5 1.27 1.91 71.3 -1.92 -0.56 25.1 76 7 9 2 4 1 3 0  MSE 174 D XMP 704 D 6 2.34 2.55 81.2 -1.84 -0.28 30.7 73 13 14 0 5 4 2 0  XMP 704 D 7 1.26 2.55 102.9 -2.18 -0.49 30.9 75 13 18 2 5 3 1 0  MSE 174 D 8 1.91 2.08 107.3 -2.15 -0.40 27.5 73 12 13 1 3 6 5 0  XMP 701 A MSE 459 D XMP 704 D 9 1.29 1.96 109.6 -2.27 -0.56 28.3 78 11 16 2 5 3 1 0  MSE 174 D 10 1.19 1.39 113.4 -2.34 -0.52 27.3 77 13 15 3 3 5 1 0  MSE 174 A MSE 459 D XMP 704 D 11 1.49 2.32 128.2 -1.56 -0.31 27.1 72 15 19 0 12 4 5 0  XMP 701 A 12 1.27 1.32 141.6 -2.20 -0.44 29.8 77 19 20 4 6 4 2 0  MSE 174 C MSE 459 D 13 1.13 1.58 146.4 -1.58 -0.38 26.5 76 19 23 2 12 3 1 0  MSE 174 A 14 1.14 2.85 150.1 -1.93 -0.40 28.4 77 17 22 3 11 3 2 0  MSE 174 D 15 1.26 1.30 153.1 -1.94 -0.35 29.7 75 19 21 3 13 5 3 0  MSE 174 C 16 1.27 2.44 151.2 -1.41 -0.42 20.8 77 10 15 3 9 3 4 0  MSE 174 D 17 1.61 1.71 44.6 -1.22 -0.57 21.0 78 2 5 0 3 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.