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PDBsum entry 2ync

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2ync calculated with MOLE 2.0 PDB id
2ync
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.60 1.72 30.7 0.76 0.81 6.2 73 2 0 0 7 4 1 0  YNC 1000 B
2 1.48 1.65 38.3 0.39 0.57 2.5 79 2 0 2 9 5 1 0  YNC 1000 A
3 2.06 2.06 48.9 -2.23 -0.62 25.5 87 8 4 8 0 2 0 0  
4 2.48 2.82 49.4 -2.07 -0.52 25.8 80 5 8 3 4 1 3 0  
5 1.15 2.58 49.8 0.05 0.12 7.5 79 1 2 3 8 4 1 0  YNC 1000 B
6 2.13 2.10 54.6 -2.17 -0.53 29.2 80 8 5 3 0 3 0 0  
7 2.11 2.09 54.9 -1.88 -0.53 25.4 76 6 5 0 0 4 0 0  
8 2.06 2.06 57.1 -2.19 -0.64 21.5 82 7 6 6 0 3 0 0  
9 1.79 1.79 61.4 -2.11 -0.59 26.3 79 6 5 3 2 2 1 0  
10 2.08 2.08 64.1 -2.09 -0.51 22.7 78 7 6 6 0 5 0 0  
11 1.89 1.89 67.5 -2.36 -0.66 24.1 85 6 6 9 0 2 1 0  
12 1.91 1.91 70.6 -2.41 -0.63 23.7 84 10 5 10 0 2 1 0  
13 1.89 1.90 70.6 -2.12 -0.63 20.1 82 8 6 8 0 3 1 0  
14 1.78 1.78 71.3 -1.75 -0.53 25.5 83 5 8 3 6 2 3 0  YNC 1000 A
15 1.81 1.81 92.8 -1.79 -0.53 24.8 86 11 6 8 6 3 1 0  YNC 1000 A
16 1.15 1.36 97.2 -0.85 -0.19 14.8 83 5 5 6 9 3 1 0  YNC 1000 B
17 1.79 1.79 100.4 -1.93 -0.67 24.4 85 7 9 9 2 3 1 0  YNC 1000 A
18 1.80 1.80 103.4 -1.90 -0.66 22.2 83 9 9 8 2 4 1 0  YNC 1000 A
19 1.39 2.36 26.3 0.63 0.61 1.3 78 0 0 1 7 4 1 0  YNC 1000 C
20 2.47 2.48 27.0 -0.35 -0.13 16.2 79 2 3 1 3 3 0 0  YNC 1000 C
21 1.39 2.23 38.0 1.04 0.58 2.8 82 1 0 2 11 4 1 0  YNC 1000 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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