PDBsum entry 2yii Go to PDB code:  Pore analysis for: 2yii calculated with MOLE 2.0 PDB id 2yii Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.50 2.70 34.9 -1.32 -0.04 12.1 78 4 3 3 2 3 4 0   2 2.38 2.56 37.4 -2.01 -0.19 19.0 75 4 4 2 2 2 4 0   3 1.43 1.42 58.1 -2.35 -0.74 28.4 77 6 4 2 1 1 1 0   4 1.53 3.30 91.5 -1.67 -0.27 27.1 74 8 8 1 6 3 2 0   5 1.43 3.32 96.7 -1.28 -0.10 18.2 75 8 7 2 7 5 4 0   6 2.10 2.89 98.8 -2.03 -0.54 23.9 83 9 7 4 3 2 0 0   7 1.46 1.86 40.6 -1.58 -0.08 16.3 70 5 5 0 5 3 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.