PDBsum entry 2y8s Go to PDB code:  Pore analysis for: 2y8s calculated with MOLE 2.0 PDB id 2y8s Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.74 1.74 36.2 0.49 0.05 5.9 83 2 0 2 11 2 4 0   2 1.92 2.10 48.2 -1.37 -0.50 16.8 86 3 2 5 3 1 1 0   3 1.20 1.68 52.7 -0.76 -0.26 13.6 81 3 3 4 10 2 4 0   4 1.14 1.16 60.5 -1.40 -0.61 18.8 78 3 5 3 1 1 1 0   5 2.20 2.62 62.4 -0.86 -0.41 11.9 91 2 3 5 2 0 5 0   6 1.23 1.24 64.7 -2.09 -0.53 24.9 78 5 4 4 1 3 0 1   7 1.54 1.51 70.5 -1.33 -0.42 15.9 90 7 3 8 2 0 4 0   8 1.88 2.38 92.5 -2.03 -0.56 23.3 84 6 8 5 3 1 3 0  BO3 1482 A GOL 1475 D 9 1.92 2.01 130.3 -2.06 -0.50 22.2 83 10 5 9 3 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.