PDBsum entry 2y3a Go to PDB code:  Pore analysis for: 2y3a calculated with MOLE 2.0 PDB id 2y3a Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.78 3.46 27.6 -2.49 -0.57 25.5 83 4 6 6 3 0 0 0   2 1.39 1.40 43.1 -0.90 -0.29 17.6 85 6 3 4 3 1 0 0   3 2.03 2.05 73.6 -1.42 -0.13 22.6 78 6 11 2 3 5 1 0  GD9 2058 A 4 1.88 3.42 85.6 -1.83 -0.25 22.8 82 12 10 6 5 3 1 0   5 1.83 3.45 94.0 -2.19 -0.39 29.1 85 13 13 8 5 2 0 0  GD9 2058 A 6 1.31 1.40 139.1 -0.92 -0.06 12.5 72 9 7 2 11 9 5 2   7 1.25 1.47 178.4 -1.38 -0.25 21.7 80 16 16 11 12 6 4 1  GD9 2058 A 8 1.37 1.31 176.8 -1.02 0.04 19.1 76 12 9 5 10 6 2 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.