PDBsum entry 2y2c Go to PDB code:  Tunnel analysis for: 2y2c calculated with MOLE 2.0 PDB id 2y2c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.50 18.7 0.03 -0.07 16.5 81 4 1 0 4 1 0 0   2 1.29 1.51 20.4 0.07 0.29 18.2 78 3 1 0 6 2 0 0   3 1.29 1.51 29.1 -0.62 -0.11 12.9 85 1 3 3 6 2 2 0   4 1.35 1.43 16.1 -0.27 -0.19 16.6 80 3 1 0 4 1 0 0   5 1.27 1.27 18.2 -2.26 -0.46 31.0 78 2 3 0 2 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.