PDBsum entry 2y1r Go to PDB code:  Pore analysis for: 2y1r calculated with MOLE 2.0 PDB id 2y1r Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   17 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.98 4.21 30.3 -2.30 -0.69 12.5 77 3 3 4 0 3 0 0   2 4.71 5.89 34.9 -2.64 -0.84 14.3 79 3 2 5 2 3 0 0   3 2.03 2.03 35.7 -1.59 -0.50 6.5 82 1 0 4 2 1 0 0   4 4.42 4.67 43.3 -2.18 -0.71 26.8 73 3 5 2 0 3 1 0   5 4.05 6.28 48.3 -2.82 -0.80 18.1 78 2 6 8 0 3 0 0   6 3.90 4.25 48.4 -2.54 -0.85 20.7 77 4 6 6 0 4 0 0   7 1.98 3.31 51.9 -1.70 -0.62 12.9 91 4 1 6 2 0 0 0   8 3.53 4.49 53.7 -2.33 -0.71 24.1 77 4 7 4 1 5 0 0   9 1.98 2.99 54.7 -2.00 -0.63 15.6 90 3 2 8 3 0 0 0   10 4.06 6.16 56.9 -2.79 -0.85 15.0 78 3 5 9 2 4 0 0   11 3.90 4.25 58.0 -2.47 -0.80 17.5 78 4 5 8 2 5 0 0   12 2.97 4.19 61.9 -2.83 -0.81 21.5 83 5 5 5 2 2 0 0  SRT 600 F 13 4.25 6.13 62.6 -2.32 -0.66 22.8 75 4 8 4 0 5 0 0   14 5.60 5.60 64.5 -2.50 -0.80 14.2 76 5 5 8 2 5 0 0   15 5.58 5.58 64.8 -2.44 -0.84 13.6 75 4 4 8 2 5 0 0   16 4.09 6.18 66.0 -2.40 -0.71 17.9 76 4 7 6 0 5 0 0   17 3.89 4.24 74.3 -2.31 -0.76 19.1 75 6 7 8 0 6 0 0   18 3.89 4.25 74.7 -2.29 -0.80 18.4 74 5 6 8 0 6 0 0   19 1.77 1.96 83.3 -2.41 -0.64 26.5 85 11 5 6 4 2 0 0   20 2.96 4.18 83.9 -2.86 -0.83 19.9 82 5 8 9 2 3 0 0  SRT 600 F 21 2.98 4.18 85.1 -2.63 -0.81 20.3 82 6 8 8 2 4 0 0  SRT 600 F 22 2.97 4.17 91.5 -2.65 -0.79 18.5 80 7 8 8 2 4 0 0  SRT 600 F 23 2.96 4.17 91.8 -2.60 -0.81 18.3 79 6 7 8 2 4 0 0  SRT 600 F Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.