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PDBsum entry 2y02

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2y02 calculated with MOLE 2.0 PDB id
2y02
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.41 3.30 49.6 -0.67 0.12 23.0 89 3 4 2 9 1 0 0  2CV 501 A 2CV 503 A Y01 401 B
2 2.44 2.84 53.3 -1.27 -0.03 29.2 84 3 6 1 8 1 0 0  Y01 401 A 2CV 501 B 2CV 503 B
3 1.41 2.01 57.3 2.18 0.86 4.5 82 0 3 3 18 6 2 1  Y01 401 A 2CV 501 A WHJ 601 A
4 1.38 2.04 76.5 1.47 0.57 4.1 76 1 3 7 12 11 1 2  2CV 501 A WHJ 601 A 2CV 501 B WHJ 601 B
5 1.38 1.60 29.2 -2.02 -0.47 25.9 85 6 2 1 2 1 1 0  2CV 502 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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