PDBsum entry 2y02 Go to PDB code:  Tunnel analysis for: 2y02 calculated with MOLE 2.0 PDB id 2y02 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 2.65 32.7 1.13 0.47 5.6 68 1 1 2 3 8 0 3  WHJ 601 A 2 1.16 2.26 32.7 0.94 0.44 8.2 74 0 3 2 6 7 0 0  2CV 504 A WHJ 601 A 3 1.16 2.29 33.1 0.20 0.18 8.1 83 2 2 5 4 6 0 0  WHJ 601 A 4 1.15 2.18 37.3 0.70 0.45 2.1 81 0 1 3 7 5 1 1  2CV 501 A WHJ 601 A 2CV 505 B 5 1.20 2.14 44.0 2.66 0.90 4.0 85 0 1 2 15 3 2 1  2CV 501 A WHJ 601 A Y01 401 B 6 1.18 2.64 50.5 2.36 0.86 1.0 80 0 1 2 13 5 2 1  2CV 501 A 2CV 505 A WHJ 601 A 2CV 501 B 7 1.15 2.36 50.8 2.88 0.99 3.2 88 0 1 2 19 4 2 1  Y01 401 A 2CV 501 A WHJ 601 A 8 1.32 2.23 70.0 1.82 0.61 3.2 79 1 1 6 12 9 1 2  2CV 501 A WHJ 601 A 2CV 501 B WHJ 601 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.