PDBsum entry 2xr9 Go to PDB code:  Tunnel analysis for: 2xr9 calculated with MOLE 2.0 PDB id 2xr9 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.09 2.47 35.3 0.89 0.43 8.8 76 2 3 1 7 4 0 0   2 1.12 2.62 50.9 0.59 0.45 8.5 71 3 2 1 6 8 0 0  SCN 1866 A 3 1.19 1.33 17.1 -1.04 -0.36 11.7 78 1 2 2 3 1 0 0   4 1.36 1.36 25.6 -0.91 -0.06 14.0 68 4 3 0 1 3 0 2   5 1.93 2.05 15.6 -1.29 -0.78 13.8 100 2 1 2 2 0 0 0  IOD 1881 A 6 1.60 1.61 17.2 -1.07 -0.77 11.6 101 1 1 2 2 0 0 0  IOD 1881 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.