PDBsum entry 2xnh Go to PDB code:  Tunnel analysis for: 2xnh calculated with MOLE 2.0 PDB id 2xnh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.82 1.82 20.9 -0.68 -0.33 7.6 69 3 0 2 3 4 1 0  MSE 106 A MSE 130 A MSE 131 A IOD 1294 A 2 1.83 1.83 21.8 -0.27 -0.13 3.6 71 1 0 2 3 4 0 0  MSE 106 A MSE 130 A MSE 131 A 3 1.19 1.19 22.2 0.11 -0.25 5.7 71 1 1 1 3 2 1 2  MSE 104 A MSE 106 A MSE 131 A 4 1.19 1.19 27.8 -0.98 -0.41 13.3 79 3 0 1 2 1 1 0  MSE 104 A MSE 106 A MSE 131 A 5 1.20 1.20 27.9 0.09 -0.20 5.8 85 3 0 3 3 2 0 0  MSE 104 A MSE 106 A MSE 131 A IOD 1301 A 6 1.19 1.19 34.2 -0.85 -0.46 9.4 77 2 0 3 2 2 0 1  MSE 104 A MSE 106 A MSE 131 A 7 1.24 1.83 15.8 1.25 0.30 6.7 77 1 1 1 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.