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PDBsum entry 2xg0
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Tunnel analysis for: 2xg0 calculated with  MOLE 2.0
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PDB id
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2xg0
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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16 tunnels,
coloured by tunnel radius |
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16 tunnels,
coloured by
tunnel radius
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16 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.19 |
1.19 |
101.5 |
-0.59 |
-0.76 |
5.2 |
74 |
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1 |
0 |
1 |
0 |
1 |
0 |
0 |
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U 566 A A 567 A U 568 A U 569 A G 570 A A 575 A U
576 A G 577 A G 808 A A 821 A U 822 A G 836 A C
837 A U 922 A C 923 A C 935 A C 936 A A 945 A G
946 A G 947 A C 964 A C 965 A G 966 A C 967 A G
968 A U 969 A A 1254 A U 1255 A A 2060 A G 2270 A
U 2357 A G 2444 A G 2447 A A 2448 A U 2449 A C
2498 A U 2500 A G 2502 A
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2 |
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1.17 |
1.15 |
107.1 |
-0.55 |
-0.76 |
4.7 |
74 |
1 |
0 |
1 |
0 |
1 |
0 |
0 |
U 566 A A 567 A U 568 A U 569 A G 570 A A 575 A U
576 A G 577 A G 808 A G 823 A A 824 A C 825 A U
827 A U 828 A A 829 A A 945 A G 946 A G 947 A C
964 A C 965 A A 1254 A U 1255 A A 2060 A G 2246 A
C 2248 A U 2249 A C 2258 A G 2259 A A 2274 A C
2424 A A 2425 A A 2426 A C 2427 A A 2430 A U 2431
A A 2433 A A 2434 A G 2444 A G 2447 A A 2448 A U
2449 A C 2498 A U 2500 A G 2502 A
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3 |
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1.14 |
1.13 |
109.0 |
-0.57 |
-0.76 |
5.0 |
74 |
1 |
0 |
1 |
0 |
1 |
0 |
0 |
U 566 A A 567 A U 568 A U 569 A G 570 A A 575 A U
576 A G 577 A G 808 A A 945 A G 947 A G 948 A C
949 A C 961 A U 963 A G 979 A C 982 A A 983 A A
984 A C 985 A G 1002 A G 1003 A A 1254 A U 1255 A
G 2029 A A 2030 A A 2031 A A 2060 A G 2444 A G
2447 A A 2448 A C 2498 A U 2500 A G 2502 A G 85 B
G 86 B G 87 B C 88 B G 89 B
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4 |
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1.24 |
1.23 |
116.6 |
-0.57 |
-0.75 |
5.0 |
74 |
1 |
0 |
1 |
0 |
1 |
0 |
0 |
U 566 A A 567 A U 568 A U 569 A G 570 A A 575 A U
576 A G 577 A G 808 A A 829 A G 830 A A 945 A G
946 A G 947 A C 964 A A 1254 A U 1255 A A 2060 A
C 2066 A G 2067 A G 2246 A A 2247 A C 2248 A U
2249 A G 2252 A G 2253 A C 2254 A G 2255 A C 2424
A A 2426 A A 2434 A A 2435 A G 2436 A G 2444 A G
2447 A A 2448 A U 2449 A C 2498 A U 2500 A G 2502
A
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5 |
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1.21 |
1.21 |
131.9 |
-0.66 |
-0.76 |
6.3 |
81 |
2 |
1 |
2 |
1 |
1 |
0 |
0 |
U 566 A A 567 A U 568 A U 569 A G 570 A A 575 A U
576 A G 577 A G 808 A G 823 A A 824 A C 825 A A
829 A G 859 A C 867 A U 868 A G 869 A U 913 A C
914 A A 945 A G 946 A G 947 A C 964 A C 965 A A
1254 A U 1255 A A 2060 A U 2249 A G 2259 A C 2260
A C 2263 A C 2264 A G 2270 A G 2271 A U 2272 A A
2273 A A 2274 A G 2321 A A 2322 A A 2328 A G 2329
A G 2330 A G 2331 A G 2444 A G 2447 A A 2448 A U
2449 A C 2498 A U 2500 A G 2502 A
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6 |
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1.20 |
1.21 |
134.3 |
-0.67 |
-0.75 |
5.9 |
78 |
3 |
0 |
2 |
0 |
1 |
1 |
0 |
U 185 A G 186 A G 187 A U 193 A G 194 A C 203 A A
204 A G 205 A U 206 A G 219 A G 220 A U 235 A C
236 A C 237 A C 253 A G 254 A A 255 A G 382 A U
383 A C 393 A A 394 A U 395 A G 425 A U 566 A A
567 A U 568 A U 576 A G 577 A U 667 A G 668 A G
669 A A 670 A C 672 A C 673 A G 674 A U 803 A A
804 A C 806 A U 807 A G 808 A G 809 A U 810 A A
1254 A U 1255 A A 2060 A G 2444 A G 2446 A G 2502
A
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7 |
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1.23 |
1.24 |
137.3 |
-0.69 |
-0.75 |
6.2 |
78 |
3 |
0 |
2 |
0 |
1 |
1 |
0 |
U 193 A G 194 A C 203 A A 204 A G 232 A A 233 A U
235 A C 236 A C 237 A C 238 A U 239 A G 240 A G
242 A C 253 A G 254 A A 255 A A 256 A A 257 A G
258 A G 259 A G 260 A G 261 A C 263 A C 264 A U
566 A A 567 A U 568 A U 576 A G 577 A U 667 A G
668 A G 669 A A 670 A C 672 A C 673 A G 674 A U
803 A A 804 A C 806 A U 807 A G 808 A G 809 A U
810 A A 1254 A U 1255 A A 2060 A G 2444 A G 2446
A G 2502 A
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8 |
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1.20 |
1.20 |
143.2 |
-0.80 |
-0.77 |
6.8 |
75 |
3 |
1 |
3 |
0 |
2 |
0 |
0 |
U 566 A A 567 A U 568 A U 569 A G 570 A A 575 A U
576 A G 577 A G 808 A G 823 A A 824 A C 825 A A
829 A A 945 A G 946 A G 947 A C 964 A C 965 A A
1254 A U 1255 A A 2060 A U 2249 A G 2259 A C 2260
A A 2274 A G 2345 A A 2360 A A 2361 A G 2362 A C
2363 A C 2364 A G 2365 A A 2366 A G 2367 A C 2368
A A 2369 A G 2370 A G 2371 A G 2372 A G 2373 A G
2375 A G 2379 A C 2380 A C 2381 A G 2382 A G 2383
A G 2389 A U 2390 A G 2428 A G 2444 A G 2447 A A
2448 A U 2449 A C 2498 A U 2500 A G 2502 A
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9 |
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1.20 |
1.21 |
151.1 |
-0.71 |
-0.74 |
6.3 |
83 |
3 |
1 |
3 |
0 |
1 |
1 |
0 |
C 40 A C 41 A G 42 A A 43 A U 193 A G 194 A C 203
A A 204 A U 206 A C 237 A C 238 A C 253 A G 254 A
C 263 A G 352 A G 430 A C 433 A U 566 A A 567 A U
568 A U 576 A G 577 A A 590 A A 609 A G 610 A C
611 A C 612 A G 613 A U 614 A U 667 A G 668 A G
669 A A 670 A C 672 A C 673 A G 674 A U 803 A A
804 A C 806 A U 807 A G 808 A G 809 A U 810 A A
1254 A U 1255 A A 2060 A G 2444 A G 2446 A G 2502
A
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10 |
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1.22 |
1.25 |
153.7 |
-0.77 |
-0.74 |
7.2 |
77 |
4 |
1 |
2 |
0 |
1 |
1 |
0 |
G 48 A G 176 A G 177 A G 178 A G 179 A G 180 A A
182 A C 183 A C 184 A U 193 A G 194 A C 203 A A
204 A U 206 A A 207 A C 208 A C 209 A C 210 A A
211 A G 212 A A 213 A G 214 A G 215 A C 253 A G
254 A C 433 A U 566 A A 567 A U 568 A U 576 A G
577 A U 667 A G 668 A G 669 A A 670 A C 672 A C
673 A G 674 A G 799 A A 800 A U 803 A A 804 A C
806 A U 807 A G 808 A G 809 A U 810 A A 1254 A U
1255 A A 2060 A G 2444 A G 2446 A G 2502 A
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11 |
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1.19 |
1.19 |
159.7 |
-0.79 |
-0.56 |
9.3 |
81 |
7 |
0 |
2 |
3 |
2 |
1 |
0 |
A 460 A C 461 A C 462 A A 470 A A 471 A A 482 A A
483 A A 492 A G 493 A A 507 A G 508 A U 566 A A
567 A U 568 A U 576 A G 577 A C 672 A C 673 A G
674 A A 675 A A 676 A A 677 A C 678 A A 751 A C
790 A C 795 A C 796 A A 800 A A 802 A U 803 A A
804 A C 806 A U 807 A G 808 A G 809 A U 810 A A
1254 A U 1255 A G 1259 A A 1321 A A 2060 A G 2444
A G 2446 A G 2502 A
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12 |
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1.22 |
1.27 |
179.7 |
-0.64 |
-0.77 |
6.1 |
78 |
5 |
1 |
1 |
0 |
1 |
0 |
0 |
C 151 A G 152 A U 566 A A 567 A U 568 A U 569 A G
570 A A 575 A U 576 A G 577 A C 678 A C 679 A G
680 A G 681 A G 682 A C 683 A U 773 A A 774 A G
775 A G 776 A A 777 A G 808 A A 829 A G 830 A A
945 A G 946 A G 947 A C 964 A A 1254 A U 1255 A U
1357 A G 1358 A A 1359 A C 1362 A C 1363 A G 1364
A A 1367 A G 1368 A G 1369 A U 1808 A A 2060 A C
2066 A G 2067 A G 2069 A G 2070 A A 2071 A G 2072
A A 2241 A G 2242 A U 2243 A U 2244 A U 2245 A G
2246 A A 2247 A C 2248 A U 2249 A G 2252 A U 2438
A G 2444 A G 2447 A A 2448 A U 2449 A C 2498 A U
2500 A G 2502 A
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13 |
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1.20 |
1.18 |
191.4 |
-0.76 |
-0.77 |
7.1 |
78 |
5 |
1 |
3 |
0 |
1 |
1 |
0 |
A 38 A A 53 A G 54 A G 68 A C 69 A G 75 A C 76 A
C 77 A A 78 A G 79 A G 102 A A 103 A U 104 A C
105 A C 106 A C 107 A U 108 A G 109 A G 110 A A
181 A A 182 A C 183 A U 193 A G 194 A C 203 A A
204 A U 206 A A 207 A C 253 A G 254 A C 433 A C
435 A C 436 A G 437 A C 451 A G 452 A G 458 A U
566 A A 567 A U 568 A U 576 A G 577 A U 667 A G
668 A G 669 A A 670 A C 672 A C 673 A G 674 A G
799 A A 800 A U 803 A A 804 A C 806 A U 807 A G
808 A G 809 A U 810 A A 1254 A U 1255 A A 2060 A
G 2444 A G 2446 A G 2502 A
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14 |
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1.21 |
1.19 |
197.1 |
-0.51 |
-0.78 |
4.5 |
74 |
1 |
0 |
1 |
0 |
1 |
0 |
0 |
U 566 A A 567 A U 568 A U 569 A G 570 A A 575 A U
576 A G 577 A C 678 A C 679 A G 680 A G 776 A A
777 A G 808 A A 829 A G 830 A A 945 A G 946 A G
947 A C 964 A A 1254 A U 1255 A U 1372 A A 1373 A
G 1421 A C 1493 A A 1494 A G 1801 A A 1802 A A
1803 A C 1804 A U 1805 A C 1806 A G 1807 A A 1810
A G 1811 A A 1812 A G 1814 A A 1815 A G 1816 A A
2060 A C 2066 A G 2067 A G 2069 A G 2070 A A 2071
A G 2072 A C 2081 A A 2082 A G 2083 A C 2084 A U
2203 A C 2205 A G 2207 A C 2229 A G 2239 A C 2240
A A 2241 A G 2242 A U 2243 A U 2244 A U 2245 A G
2246 A A 2247 A C 2248 A U 2249 A G 2252 A U 2438
A G 2444 A G 2447 A A 2448 A U 2449 A C 2498 A U
2500 A G 2502 A
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15 |
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1.33 |
3.08 |
18.4 |
2.30 |
0.79 |
3.5 |
72 |
1 |
1 |
0 |
7 |
1 |
0 |
0 |
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16 |
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1.66 |
2.72 |
19.6 |
1.34 |
0.30 |
2.8 |
79 |
1 |
0 |
1 |
6 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program