PDBsum entry 2xdf Go to PDB code:  Pore analysis for: 2xdf calculated with MOLE 2.0 PDB id 2xdf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.38 27.9 -2.03 -0.66 28.9 81 2 4 2 2 1 0 0   2 1.39 2.33 41.6 -1.79 -0.38 31.0 84 5 5 1 4 0 0 0   3 1.22 1.23 86.7 0.60 0.16 8.9 81 6 2 4 12 2 1 0   4 1.21 1.38 86.8 1.23 0.40 8.6 82 6 2 4 15 2 1 0   5 1.40 1.40 97.1 -1.75 -0.34 30.0 77 5 7 1 4 2 3 0   6 1.16 1.94 129.6 -0.30 -0.22 15.8 78 6 12 6 18 2 1 0   7 1.23 1.23 25.5 2.34 0.64 1.1 90 0 0 2 9 0 0 0   8 2.20 2.55 25.9 -1.59 -0.15 30.0 92 2 5 2 3 0 0 0   9 1.23 1.36 26.6 2.34 0.63 1.1 85 0 0 1 8 0 0 0   10 1.25 1.37 28.8 3.54 1.08 0.4 87 0 0 1 11 0 0 0   11 1.39 2.24 33.8 -1.61 -0.28 29.2 84 5 3 1 3 0 0 0   12 1.16 1.16 42.9 -2.37 -0.55 29.7 81 6 3 2 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.