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PDBsum entry 2x8s

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2x8s calculated with MOLE 2.0 PDB id
2x8s
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.14 1.18 17.2 -0.29 -0.13 7.6 78 1 2 2 1 4 0 0  GOL 1475 A
2 1.15 1.15 16.3 -0.27 -0.09 9.3 80 1 2 2 2 4 0 0  GOL 1476 B
3 1.15 1.15 26.2 -0.70 -0.14 12.2 74 2 2 1 2 6 1 0  GOL 1476 B
4 1.78 1.82 15.8 -0.38 0.49 13.6 74 1 3 0 4 3 0 0  AHR 2 D AHR 3 D
5 1.53 1.61 16.1 -0.93 0.31 19.4 68 1 3 0 2 3 0 0  AHR 3 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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