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PDBsum entry 2x86
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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2x86 calculated with MOLE 2.0 PDB id
2x86
Pores calculated on whole structure Pores calculated excluding ligands
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15 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.98 2.86 27.3 -1.87 -0.46 22.2 85 1 4 2 2 1 0 0  
2 1.42 1.58 53.0 -0.89 -0.17 13.2 83 6 1 6 3 5 0 0  NAP 400 G ADP 401 G BMA 402 G
3 1.35 1.55 94.5 -1.20 -0.24 18.4 82 9 9 8 6 5 0 1  NAP 400 I ADP 401 I BMA 402 I
4 2.47 2.48 113.4 -1.83 -0.63 21.3 87 7 9 7 4 1 1 0  
5 3.56 3.58 116.9 -1.23 -0.26 23.6 82 7 12 5 7 3 0 1  NAP 400 B
6 1.58 2.74 129.4 -1.17 -0.22 23.7 80 9 13 5 7 4 0 1  NAP 400 A
7 2.07 2.07 133.9 -1.72 -0.61 21.3 86 10 13 10 9 2 1 0  
8 1.42 1.61 136.9 -1.47 -0.29 21.1 81 11 13 9 6 7 0 1  NAP 400 G ADP 401 G BMA 402 G
9 1.47 2.61 136.5 -1.54 -0.45 23.8 85 6 20 8 10 1 0 0  
10 1.50 2.73 141.8 -1.38 -0.35 21.0 80 11 9 8 6 6 0 1  NAP 400 A NAP 400 B
11 1.48 2.61 146.1 -1.73 -0.37 27.3 80 10 18 5 7 5 0 0  NAP 400 F
12 1.42 2.44 151.0 -1.99 -0.45 28.2 80 9 19 6 6 4 0 0  
13 1.40 2.52 167.1 -1.44 -0.32 20.2 80 15 12 11 8 9 0 1  NAP 400 F NAP 400 I ADP 401 I BMA 402 I
14 1.37 2.42 166.9 -1.72 -0.44 25.0 86 12 19 9 11 2 1 0  NAP 400 L
15 2.56 2.62 174.8 -1.95 -0.54 25.2 80 13 13 7 7 6 1 0  
16 1.32 2.37 173.5 -1.77 -0.43 26.8 83 12 20 7 11 3 1 0  
17 2.45 3.23 182.2 -2.12 -0.64 24.8 84 11 17 9 4 3 1 0  
18 1.49 2.70 207.0 -1.74 -0.39 24.3 80 15 15 9 6 7 0 1  NAP 400 B NAP 400 C
19 1.23 2.35 235.7 -1.98 -0.50 27.2 84 16 27 11 11 4 1 0  NAP 400 L
20 1.50 2.73 240.4 -1.78 -0.30 25.1 78 18 18 9 7 9 0 0  NAP 400 C NAP 400 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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