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PDBsum entry 2wsf

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2wsf calculated with MOLE 2.0 PDB id
2wsf
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.66 1.72 25.1 -0.21 0.09 12.5 73 2 0 2 2 4 0 0  BCR 104 G
2 1.82 2.14 55.3 -0.05 0.08 5.4 73 2 2 2 4 6 0 1  LMU 852 A
3 1.56 1.72 59.8 -0.08 0.07 5.1 80 1 2 3 4 6 0 0  LMU 852 A
4 1.08 1.47 78.5 -1.63 -0.32 15.3 76 3 5 4 6 2 3 0  
5 1.38 1.40 89.5 0.20 0.23 12.6 70 3 3 0 9 6 2 0  CLA 815 A CLA 816 A CLA 839 A
6 1.58 1.82 92.1 -0.57 -0.17 14.1 78 4 6 4 9 5 3 1  CLA 316 2 LMU 202 F
7 2.21 2.31 107.2 0.75 0.76 13.8 75 9 0 1 15 7 1 0  CLA 809 A CLA 826 A CLA 838 A BCR 845 A CLA 850 A
CLA 851 A CLA 817 B CLA 818 B CLA 820 B CLA 824 B
CLA 826 B CLA 827 B CLA 832 B CLA 833 B CLA 834 B
CLA 835 B CLA 837 B CLA 838 B CLA 839 B BCR 846 B
CLA 201 F BCR 203 F BCR 204 F CLA 206 F BCR 102 J
8 2.29 3.18 121.3 0.38 0.43 11.1 74 10 1 2 16 6 2 0  CLA 837 A CLA 838 A PQN 842 A CLA 806 B CLA 831 B
CLA 832 B CLA 201 F LMU 202 F BCR 203 F BCR 204 F
9 1.22 2.56 128.7 -0.29 0.26 11.2 73 4 2 4 13 10 2 1  CLA 805 A CLA 813 A CLA 814 A CLA 815 A CLA 816 A
CLA 818 A CLA 827 A CLA 839 A CLA 840 A BCR 843 A
10 1.24 2.01 131.2 -0.33 0.36 6.7 76 2 0 6 12 8 1 0  CLA 817 B CLA 818 B CLA 835 B
11 1.16 1.15 191.3 0.09 0.16 8.6 78 8 2 8 25 9 4 0  CLA 804 A CLA 805 A CLA 806 A CLA 808 A CLA 813 A
CLA 818 A CLA 826 A CLA 827 A CLA 828 A BCR 845 A
12 1.56 1.63 204.7 0.26 0.61 13.5 75 16 2 6 27 16 3 0  CLA 817 A CLA 818 A CLA 825 A CLA 827 A CLA 830 A
CLA 831 A CLA 832 A CLA 834 A CLA 835 A BCR 801 B
CLA 803 B CLA 807 B CLA 808 B CLA 809 B CLA 810 B
CLA 811 B CLA 812 B CLA 813 B CLA 814 B CLA 815 B
CLA 828 B CLA 829 B CLA 830 B BCR 844 B BCR 847 B
LMG 848 B CLA 108 H BCR 101 I
13 1.79 1.74 208.5 -0.73 -0.02 19.0 77 14 8 8 20 9 1 0  LMU 805 B CLA 808 B CLA 809 B CLA 814 B CLA 819 B
CLA 830 B BCR 844 B LMG 848 B LMU 101 E LMU 202 F
FRU 2 V
14 1.53 1.74 230.0 -0.14 0.21 14.8 74 15 5 6 26 12 3 1  CLA 305 2 CLA 316 2 LMU 319 2 LMU 316 4 CLA 837 A
CLA 838 A PQN 842 A CLA 806 B CLA 831 B CLA 832 B
CLA 201 F LMU 202 F BCR 203 F BCR 204 F
15 2.51 2.51 42.2 -1.06 0.02 26.2 82 4 1 0 2 2 1 0  CLA 301 2 CLA 307 4
16 1.30 1.30 26.0 -2.65 -0.36 29.1 81 3 2 2 2 2 1 0  CLA 209 1
17 1.60 1.76 52.5 -0.86 -0.13 24.2 81 5 3 0 7 0 1 0  CLA 201 1 CLA 209 1 CLA 212 1 CLA 215 1

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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