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PDBsum entry 2wpb

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2wpb calculated with MOLE 2.0 PDB id
2wpb
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 1.52 18.8 1.69 0.56 5.9 73 1 0 2 6 0 0 0  
2 1.41 1.92 19.8 2.12 0.62 2.8 73 1 0 2 6 0 0 0  
3 1.42 1.91 23.4 1.26 0.38 7.6 73 2 1 2 7 0 0 0  
4 1.12 1.12 32.0 -0.99 -0.51 6.9 79 2 0 3 1 1 0 0  
5 1.13 1.13 32.7 -0.98 -0.55 7.4 79 2 0 3 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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