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PDBsum entry 2wp5

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2wp5 calculated with MOLE 2.0 PDB id
2wp5
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 1.17 34.3 -0.93 -0.48 13.4 83 2 2 2 3 3 0 1  FAD 998 C WP5 1000 C
2 2.28 3.63 52.7 -1.39 -0.24 22.5 77 6 8 4 7 4 4 0  WP5 1000 A WP5 1000 B
3 1.49 1.65 60.9 -1.02 -0.51 11.9 84 4 4 4 5 2 1 1  FAD 998 B
4 1.18 1.18 76.5 -0.63 -0.23 12.5 86 4 6 4 5 3 0 1  FAD 998 C WP5 1000 C
5 2.25 3.39 84.8 -1.55 -0.21 23.2 78 9 11 6 8 6 4 0  WP5 1000 C WP5 1000 D
6 1.38 1.47 87.6 -1.22 -0.44 14.8 87 4 4 6 7 3 2 0  FAD 998 A MRD 1491 A
7 2.42 2.42 118.6 -1.13 -0.33 15.7 78 6 4 3 4 3 2 0  WP5 1000 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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