spacer
spacer

PDBsum entry 2wc0

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2wc0 calculated with MOLE 2.0 PDB id
2wc0
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.29 1.79 84.1 0.19 0.18 6.1 77 4 0 6 17 6 2 0  
2 1.20 1.21 84.7 -0.54 -0.05 12.4 78 5 4 8 13 5 0 1  
3 1.18 1.34 88.8 -0.35 0.05 9.9 79 5 3 8 16 5 2 1  
4 1.30 1.80 93.8 0.05 0.17 8.5 76 5 3 5 14 7 1 1  
5 1.19 1.35 126.5 -1.05 -0.24 13.4 82 7 6 14 14 8 2 1  DIO 3014 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer