spacer
spacer

PDBsum entry 2w3a

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2w3a calculated with MOLE 2.0 PDB id
2w3a
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.51 2.64 28.6 -0.48 -0.33 11.2 78 1 2 2 2 1 2 0  
2 1.14 1.14 39.0 0.59 0.01 7.4 77 2 3 1 7 4 2 0  TOP 1190 A
3 1.14 1.14 44.6 0.28 -0.14 5.0 87 1 1 3 6 4 0 0  NDP 1188 A TOP 1190 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer