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PDBsum entry 2vzi

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Top Page protein ligands Protein-protein interface(s) links
Cell adhesion PDB id
2vzi
Contents
Protein chains
13 a.a.
126 a.a.
Ligands
PG4
EDO ×2
PGE ×2
Waters ×39

References listed in PDB file
Key reference
Title Structural analysis of the interactions between paxillin ld motifs and alpha-Parvin.
Authors S.Lorenz, I.Vakonakis, E.D.Lowe, I.D.Campbell, M.E.Noble, M.K.Hoellerer.
Ref. Structure, 2008, 16, 1521-1531. [DOI no: 10.1016/j.str.2008.08.007]
PubMed id 18940607
Abstract
The adaptor protein paxillin contains five conserved leucine-rich (LD) motifs that interact with a variety of focal adhesion proteins, such as alpha-parvin. Here, we report the first crystal structure of the C-terminal calponin homology domain (CH(C)) of alpha-parvin at 1.05 A resolution and show that it is able to bind all the LD motifs, with some selectivity for LD1, LD2, and LD4. Cocrystal structures with these LD motifs reveal the molecular details of their interactions with a common binding site on alpha-parvin-CH(C), which is located at the rim of the canonical fold and includes part of the inter-CH domain linker. Surprisingly, this binding site can accommodate LD motifs in two antiparallel orientations. Taken together, these results reveal an unusual degree of binding degeneracy in the paxillin/alpha-parvin system that may facilitate the assembly of dynamic signaling complexes in the cell.
Figure 4.
Figure 4. Cocrystal Structure of α-Parvin-CH[C] with Paxillin LD1
Superposition of the ribbon representations of α-parvin-CH[C] in blue and its complex with the LD1 peptide in gold and green, respectively. Secondary structural elements are indicated.
Figure 5.
Figure 5. PRE Experiment with Spin-Labeled LD1
(A) Details of the ^1H-^15N HSQC spectra of 230 μM ^15N-enriched α-parvin-CH[C] and 250 μM PROXYL-labeled LD1 peptide in the absence (left) and presence (right) of 5 mM ascorbate. The latter serves to reduce the spin label, thereby eliminating PRE effects. The binding orientation of LD1 seen in the crystal structure is denoted “forward.”
(B) Ribbon representation of α-parvin-CH[C] in gold and LD1 in green. The position of α-parvin residues 257 and 370 are highlighted in blue and red, respectively.
The above figures are reprinted from an Open Access publication published by Cell Press: Structure (2008, 16, 1521-1531) copyright 2008.
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