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PDBsum entry 2vxo

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2vxo calculated with MOLE 2.0 PDB id
2vxo
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.16 3.25 57.5 1.21 0.27 5.4 81 3 1 3 12 1 2 0  XMP 1694 B
2 1.11 2.96 57.1 0.31 0.20 14.2 81 5 2 3 11 2 1 0  SO4 1697 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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