PDBsum entry 2vs8 Go to PDB code:  Tunnel analysis for: 2vs8 calculated with MOLE 2.0 PDB id 2vs8 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.51 18.7 -0.09 0.04 8.5 74 1 1 1 3 1 0 0  DG 23 M DC 24 M DG 25 M 2 1.34 1.51 27.0 -1.37 -0.21 20.0 74 2 1 1 3 1 0 0  DG 21 M DC 22 M DG 23 M DC 24 M DG 25 M 3 1.41 1.41 15.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  DG 11 L DT 12 L DA 13 L DA 14 L DG 15 M DA 14 N DC 15 N DC 16 O DC 17 O DG 18 O 4 1.41 1.41 16.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  DG 10 L DG 11 L DT 12 L DA 13 L DA 14 L DG 15 M D A 14 N DC 15 N DC 16 O DC 17 O DG 18 O 5 1.28 1.28 19.8 -0.50 -0.79 4.7 72 1 0 0 0 0 0 0  DA 14 L DG 15 M DT 16 M DT 17 M DT 13 N DA 14 N DC 15 N 6 1.35 1.35 17.3 -1.47 -0.40 23.1 78 2 2 0 1 1 0 0  DC 8 B DG 9 B DG 10 B DC 15 D DC 16 E 7 1.39 1.38 19.7 -1.18 -0.34 19.2 77 1 2 0 1 1 0 0  DC 7 B DC 8 B DG 9 B DC 15 D DC 16 E Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.