PDBsum entry 2vr5 Go to PDB code:  Tunnel analysis for: 2vr5 calculated with MOLE 2.0 PDB id 2vr5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.86 18.5 0.30 0.23 7.3 71 1 1 0 4 3 1 0   2 1.33 1.33 15.6 -1.41 -0.25 15.4 71 2 2 0 2 1 1 0   3 1.35 1.35 18.2 -1.04 -0.28 13.1 77 2 2 0 2 1 1 0   4 1.34 1.34 19.2 0.06 0.10 9.0 75 2 2 0 4 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.