PDBsum entry 2vqf Go to PDB code:  Pore analysis for: 2vqf calculated with MOLE 2.0 PDB id 2vqf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.59 2.69 45.3 -0.84 -0.76 6.8 80 3 0 1 0 0 1 0  G 126 A G 127 A U 129 A G 129 A i:A C 131 A C 132 A A 185 A C 186 A C 187 A G 190 A i:H G 190 A i:G G 190 A i:F C 225 A G 226 A G 227 A A 228 A U 229 A G 230 A G 231 A U 256 A G 257 A U 605 A G 606 A A 607 A 2 3.10 3.10 50.4 -0.42 -0.80 3.7 72 1 0 0 0 0 0 0  U 118 A A 119 A A 120 A G 122 A C 123 A G 124 A U 125 A G 126 A G 127 A U 229 A G 230 A G 231 A G 232 A C 233 A C 234 A C 248 A U 249 A A 250 A U 252 A C 267 A C 268 A G 284 A C 312 A A 313 A C 314 A G 319 A C 320 A C 328 A U 605 A G 606 A A 607 A U 1425 A C 1426 A G 1476 A 3 3.51 3.51 51.4 -0.72 -0.72 7.5 67 2 1 0 1 1 0 0  U 244 A C 245 A C 248 A G 285 A G 286 A G 894 A G 895 A A 908 A A 1413 A U 1414 A G 1476 A C 1477 A C 1478 A C 1479 A G 1480 A U 1481 A G 1482 A 4 2.78 2.78 64.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  C 866 A G 867 A G 887 A G 890 A G 902 A G 916 A G 917 A A 918 A A 919 A U 920 A G 1082 A U 1391 A G 1392 A U 1393 A A 1394 A C 1404 A G 1405 A U 1406 A C 1407 A G 1486 A G 1487 A C 1509 A U 1510 A G 1511 A U 1512 A G 1516 A G 1517 A A 1518 A A 1519 A G 1520 A G 1529 A G 1530 A MG 1795 A K 1824 A K 1865 A 5 2.49 2.51 79.2 -1.26 -0.73 13.8 75 5 1 1 0 0 1 0  G 661 A G 662 A A 663 A G 664 A A 665 A G 667 A G 668 A U 669 A G 670 A G 671 A U 672 A G 673 A G 674 A A 675 A G 709 A G 710 A G 711 A A 712 A G 713 A G 714 A A 715 A A 733 A G 734 A C 735 A C 736 A A 737 A U 740 A C 806 A MG 1620 A MG 1769 A K 1819 A K 1845 A 6 3.09 3.09 79.1 -0.49 -0.74 5.5 66 1 1 0 1 1 0 0  G 117 A U 118 A A 119 A A 120 A G 122 A C 123 A G 124 A U 125 A G 126 A G 127 A U 229 A G 230 A G 231 A G 232 A C 233 A C 234 A U 252 A C 267 A C 268 A G 286 A U 287 A C 312 A A 313 A C 314 A G 318 A G 319 A C 320 A C 328 A U 605 A G 606 A A 607 A A 1413 A U 1414 A G 1423 A C 1424 A U 1425 A C 1426 A C 1478 A C 1479 A G 1480 A U 1481 A G 1482 A 7 2.45 2.48 91.7 -1.58 -0.67 18.2 72 6 6 1 0 2 1 0  G 7 A U 229 A G 299 A A 300 A U 565 A G 566 A C 600 A C 601 A A 602 A U 603 A G 604 A U 605 A G 606 A A 608 A G 629 A G 630 A G 631 A A 632 A G 633 A G 858 A A 859 A A 860 A G 861 A C 862 A U 863 A C 866 A G 867 A U 920 A C 1076 A G 1077 A U 1078 A G 1082 A MG 1655 A MG 1777 A MG 1803 A K 1857 A 8 3.06 3.06 94.9 -0.57 -0.74 5.7 68 1 2 0 1 1 0 0  C 242 A U 244 A G 286 A A 573 A A 574 A U 884 A G 885 A G 886 A G 887 A G 888 A A 889 A G 890 A G 902 A A 907 A A 908 A G 1405 A U 1406 A C 1407 A C 1412 A A 1413 A U 1414 A C 1479 A G 1480 A U 1481 A G 1482 A G 1486 A G 1487 A U 1510 A G 1511 A U 1512 A G 1516 A G 1517 A A 1518 A A 1519 A G 1520 A 9 2.80 2.80 95.0 -0.58 -0.75 5.6 68 1 2 0 1 1 0 0  C 242 A U 244 A G 286 A A 572 A A 573 A A 574 A C 866 A G 867 A U 884 A G 885 A G 886 A G 887 A G 888 A A 889 A G 890 A A 907 A A 908 A G 916 A G 917 A A 918 A A 919 A U 920 A U 1391 A G 1392 A U 1393 A A 1394 A C 1412 A A 1413 A U 1414 A C 1479 A G 1480 A U 1481 A G 1482 A C 1509 A U 1510 A G 1529 A G 1530 A MG 1795 A K 1824 A K 1865 A 10 2.93 3.02 102.6 -0.62 -0.67 6.6 79 2 0 1 1 1 0 0  G 693 A U 723 A G 724 A A 819 A G 855 A C 856 A C 857 A C 866 A G 867 A C 868 A A 919 A U 920 A G 1082 A G 1173 A G 1174 A C 1378 A G 1379 A U 1380 A U 1381 A U 1391 A G 1392 A A 1503 A A 1507 A C 1527 A U 1528 A G 1529 A G 1530 A A 1531 A A 1534 A K 1841 A K 1861 A K 1865 A 11 2.01 2.01 104.0 -0.98 -0.76 10.7 76 6 1 1 0 0 0 0  U 244 A C 245 A A 246 A C 248 A G 661 A G 662 A A 663 A G 664 A A 665 A G 667 A G 668 A U 669 A C 732 A A 733 A G 734 A C 735 A C 736 A A 737 A U 740 A G 761 A C 762 A G 763 A C 764 A G 765 A A 766 A A 767 A C 806 A A 807 A C 808 A G 809 A C 810 A C 811 A C 812 A G 894 A G 895 A C 896 A C 897 A G 903 A C 904 A G 1476 A C 1477 A MG 1620 A MG 1730 A K 1819 A K 1839 A K 1845 A K 1849 A 12 3.01 3.01 111.3 -0.93 -0.77 9.8 86 5 1 3 0 0 0 0  G 661 A G 662 A A 663 A G 664 A A 665 A G 667 A G 668 A U 669 A A 716 A C 717 A U 723 A G 724 A C 732 A A 733 A G 734 A C 735 A C 736 A A 737 A U 740 A C 805 A C 806 A A 819 A G 855 A C 856 A C 857 A C 866 A G 867 A C 868 A A 919 A U 920 A U 1391 A G 1392 A G 1525 A G 1526 A C 1527 A U 1528 A G 1529 A MG 1620 A K 1819 A K 1845 A K 1861 A K 1865 A 13 2.03 2.03 114.1 -0.60 -0.77 5.8 68 3 0 0 0 0 1 0  U 244 A C 245 A A 246 A C 248 A G 668 A U 669 A G 670 A G 671 A U 672 A G 673 A G 674 A A 675 A G 709 A G 710 A G 711 A A 712 A G 713 A G 714 A A 715 A C 732 A A 733 A G 761 A C 762 A G 763 A C 764 A G 765 A A 766 A A 767 A C 806 A A 807 A C 808 A G 809 A C 810 A C 811 A C 812 A G 894 A G 895 A C 896 A C 897 A G 903 A C 904 A G 1476 A C 1477 A MG 1730 A MG 1769 A K 1839 A K 1849 A 14 2.84 2.84 118.7 -1.23 -0.73 13.6 84 6 1 3 0 0 0 0  G 661 A G 662 A A 663 A G 664 A A 665 A G 667 A G 668 A U 669 A A 716 A C 717 A C 732 A A 733 A G 734 A C 735 A C 736 A A 737 A U 740 A C 805 A C 806 A G 902 A U 1406 A C 1407 A G 1486 A G 1487 A G 1508 A C 1509 A U 1510 A G 1511 A U 1512 A G 1516 A G 1517 A A 1518 A A 1519 A G 1520 A G 1521 A U 1522 A G 1523 A C 1524 A G 1525 A G 1526 A C 1527 A MG 1620 A MG 1705 A K 1819 A K 1845 A 15 2.54 2.61 118.0 -0.54 -0.78 4.6 86 2 0 2 0 0 1 0  A 665 A U 669 A G 670 A G 671 A U 672 A G 673 A G 674 A A 675 A G 709 A G 710 A G 711 A A 712 A G 713 A G 714 A A 715 A A 716 A C 717 A U 723 A G 724 A C 732 A A 733 A C 805 A C 806 A A 819 A G 855 A C 856 A C 857 A C 866 A G 867 A C 868 A A 919 A U 920 A G 1082 A U 1391 A G 1392 A G 1525 A G 1526 A C 1527 A U 1528 A G 1529 A MG 1769 A K 1861 A K 1865 A 16 2.93 3.03 125.7 -1.13 -0.67 12.6 81 7 1 3 1 1 0 0  G 661 A G 662 A A 663 A G 664 A A 665 A G 667 A G 668 A U 669 A G 693 A A 716 A C 717 A C 732 A A 733 A G 734 A C 735 A C 736 A A 737 A U 740 A C 805 A C 806 A G 1173 A G 1174 A C 1378 A G 1379 A U 1380 A U 1381 A A 1503 A A 1507 A G 1525 A G 1526 A C 1527 A G 1530 A A 1531 A A 1534 A MG 1620 A K 1819 A K 1841 A K 1845 A 17 2.50 2.57 138.0 -0.80 -0.57 12.4 78 9 2 0 5 0 2 0  U 229 A G 299 A A 300 A U 565 A G 567 A G 568 A C 569 A C 600 A C 601 A A 602 A U 603 A G 604 A U 605 A G 606 A A 608 A G 629 A G 630 A G 631 A A 632 A G 633 A G 654 A A 655 A C 656 A G 657 A G 658 A U 659 A G 660 A G 661 A G 662 A U 743 A C 744 A C 745 A A 746 A C 747 A C 748 A G 821 A C 822 A G 823 A C 824 A G 825 A C 826 A G 852 A G 853 A U 871 A A 872 A A 873 A G 874 A G 876 A C 877 A MG 1614 A MG 1623 A MG 1777 A MG 1803 A K 1819 A K 1835 A K 1845 A 18 1.67 1.67 138.8 -0.88 -0.81 8.5 81 2 1 1 0 0 0 0  C 58 A A 59 A U 62 A C 63 A G 64 A G 97 A U 98 A C 99 A A 101 A G 126 A G 127 A U 129 A G 129 A i: A C 131 A C 132 A U 133 A A 134 A C 135 A C 136 A C 137 A G 138 A G 139 A A 141 A C 218 A C 219 A C 221 A U 222 A C 224 A C 225 A G 226 A G 227 A A 228 A U 229 A G 230 A G 231 A C 372 A A 373 A A 374 A G 377 A C 379 A G 380 A A 382 A A 383 A G 384 A C 385 A C 386 A U 387 A C 454 A G 462 A U 605 A G 606 A A 607 A MG 1617 A MG 1630 A MG 1644 A MG 1709 A MG 1713 A K 1840 A 19 2.61 2.61 143.3 -0.52 -0.79 4.8 77 2 0 0 0 0 0 0  G 52 A A 53 A C 54 A A 55 A U 56 A C 58 A A 59 A G 61 A U 62 A C 63 A G 64 A G 97 A U 98 A C 99 A A 101 A G 117 A U 118 A C 248 A U 249 A G 284 A G 285 A G 316 A G 317 A G 318 A G 319 A A 338 A C 339 A U 340 A C 341 A G 350 A G 351 A U 359 A A 383 A G 1423 A C 1424 A U 1425 A C 1426 A G 1476 A MG 1684 A MG 1709 A 20 2.30 2.30 147.7 -1.02 -0.74 11.4 74 8 3 1 1 1 0 0  C 242 A A 243 A U 244 A G 286 A G 661 A G 662 A A 663 A G 664 A A 665 A G 667 A G 668 A U 669 A C 732 A A 733 A G 734 A C 735 A C 736 A A 737 A U 740 A G 760 A G 761 A C 762 A G 763 A C 764 A G 765 A A 766 A A 767 A C 806 A A 807 A C 808 A G 809 A C 810 A C 811 A C 812 A C 882 A G 895 A C 896 A C 897 A G 903 A C 904 A U 905 A G 906 A A 907 A A 908 A A 1413 A U 1414 A C 1479 A G 1480 A U 1481 A G 1482 A MG 1620 A MG 1730 A K 1819 A K 1839 A K 1845 A K 1849 A 21 2.51 2.51 149.9 -0.53 -0.75 5.7 69 2 1 0 1 1 0 0  G 52 A A 53 A C 54 A A 55 A U 56 A C 58 A A 59 A G 61 A U 62 A C 63 A G 64 A G 97 A U 98 A C 99 A A 101 A G 117 A U 118 A G 286 A U 287 A G 316 A G 317 A A 338 A C 339 A U 340 A C 341 A G 350 A G 351 A U 359 A A 383 A A 1413 A U 1414 A G 1423 A C 1424 A U 1425 A C 1478 A C 1479 A G 1480 A U 1481 A G 1482 A MG 1684 A MG 1709 A 22 2.40 2.40 147.7 -0.67 -0.74 6.9 68 4 2 0 1 1 1 0  C 242 A A 243 A U 244 A G 286 A G 668 A U 669 A G 670 A G 671 A U 672 A G 673 A G 674 A A 675 A G 709 A G 710 A G 711 A A 712 A G 713 A G 714 A A 715 A C 732 A A 733 A G 760 A G 761 A C 762 A G 763 A C 764 A G 765 A A 766 A A 767 A C 806 A A 807 A C 808 A G 809 A C 810 A C 811 A C 812 A C 882 A G 895 A C 896 A C 897 A G 903 A C 904 A U 905 A G 906 A A 907 A A 908 A C 1412 A A 1413 A U 1414 A C 1479 A G 1480 A U 1481 A G 1482 A MG 1730 A MG 1769 A K 1839 A K 1849 A 23 2.52 2.52 171.2 -0.57 -0.53 9.8 81 6 1 1 6 1 1 0  U 229 A G 299 A A 300 A U 565 A G 567 A G 568 A C 569 A C 600 A C 601 A A 602 A U 603 A G 604 A U 605 A G 606 A A 608 A G 629 A G 630 A G 631 A A 632 A G 633 A A 665 A G 693 A U 723 A G 724 A G 725 A G 727 A A 729 A G 731 A G 818 A G 821 A C 822 A G 823 A C 824 A G 854 A G 855 A U 871 A A 872 A A 873 A G 874 A G 876 A C 877 A G 1173 A G 1174 A C 1378 A G 1379 A U 1380 A U 1381 A A 1503 A A 1507 A C 1527 A U 1528 A G 1530 A A 1531 A A 1534 A MG 1605 A MG 1777 A MG 1803 A K 1835 A K 1841 A K 1861 A 24 2.32 2.32 172.8 -0.58 -0.73 5.7 67 5 0 0 1 0 3 0  U 229 A G 238 A U 239 A C 240 A C 241 A C 242 A A 243 A U 244 A G 281 A G 301 A G 302 A U 598 A C 599 A C 600 A C 601 A A 602 A U 603 A G 604 A U 605 A G 606 A A 608 A G 629 A G 630 A G 631 A A 632 A G 633 A C 634 A G 668 A U 669 A G 670 A G 671 A U 672 A G 673 A G 674 A A 675 A G 709 A G 710 A G 711 A A 712 A G 713 A G 714 A A 715 A C 732 A A 733 A G 760 A G 761 A C 762 A G 763 A C 764 A G 765 A A 766 A A 767 A C 806 A A 807 A C 808 A G 809 A C 810 A C 811 A C 812 A C 882 A G 895 A C 896 A C 897 A G 903 A C 904 A U 905 A MG 1730 A MG 1769 A MG 1777 A MG 1803 A K 1839 A K 1849 A K 1853 A 25 1.73 1.73 185.9 -1.08 -0.71 11.8 73 7 5 1 0 2 1 0  U 5 A G 6 A G 7 A U 30 A G 44 A U 45 A C 58 A A 59 A U 62 A C 63 A G 64 A G 97 A U 98 A C 99 A A 101 A C 295 A U 296 A G 297 A G 299 A A 300 A G 306 A C 307 A C 308 A C 355 A A 356 A C 369 A C 370 A G 371 A C 372 A A 383 A C 386 A U 387 A G 388 A C 390 A G 391 A G 392 A A 393 A C 400 A U 565 A G 566 A A 611 A C 612 A C 623 A C 624 A G 630 A G 858 A A 859 A A 860 A G 861 A C 862 A U 863 A C 866 A G 867 A U 920 A C 1076 A G 1077 A U 1078 A G 1082 A MG 1617 A MG 1625 A MG 1655 A MG 1709 A K 1857 A 26 1.82 2.35 192.5 -0.67 -0.68 7.3 74 8 0 2 4 0 1 0  C 58 A G 61 A U 62 A C 63 A G 64 A G 97 A U 98 A C 99 A A 101 A G 102 A A 149 A C 150 A A 151 A A 152 A C 163 A U 164 A C 165 A G 166 A C 175 A C 176 A C 177 A C 178 A A 179 A U 180 A G 181 A U 182 A G 184 A A 185 A C 186 A C 187 A C 188 A G 189 A U 190 A i:L G 190 A i:K U 190 A i:J G 190 A i:G G 190 A i:I G 190 A i:H G 190 A i:F C 190 A G 191 A U 192 A C 193 A U 256 A G 257 A A 383 A C 1449 A A 1451 A G 1453 A G 1454 A G 1455 A C 1459 A MG 1679 A MG 1709 A MG 1717 A MG 1718 A MG 1719 A K 1825 A 27 1.54 1.60 217.3 -1.27 -0.73 13.5 84 13 3 7 2 1 0 0  G 661 A G 662 A A 663 A G 664 A A 665 A G 667 A G 668 A U 669 A G 693 A A 716 A C 717 A C 732 A A 733 A G 734 A C 735 A C 736 A A 737 A U 740 A C 805 A C 806 A G 926 A G 928 A C 936 A A 937 A A 938 A G 939 A C 940 A G 941 A G 942 A C 1237 A A 1238 A G 1241 A C 1242 A C 1243 A A 1289 A G 1290 A G 1291 A U 1292 A G 1293 A G 1295 A C 1336 A G 1337 A A 1340 A U 1341 A C 1342 A U 1351 A C 1352 A C 1382 A C 1383 A A 1503 A A 1507 A G 1525 A G 1526 A C 1527 A G 1530 A A 1531 A A 1534 A C 1539 A U 1540 A MG 1620 A MG 1631 A MG 1659 A MG 1673 A K 1819 A K 1845 A 28 2.42 2.69 229.2 -1.76 -0.62 18.4 75 18 10 7 2 5 4 0  G 7 A U 229 A G 299 A A 300 A U 565 A G 566 A C 600 A C 601 A A 602 A U 603 A G 604 A U 605 A G 606 A A 608 A G 629 A G 630 A G 631 A A 632 A G 633 A G 861 A C 862 A G 1072 A U 1073 A G 1074 A C 1075 A C 1076 A G 1077 A U 1078 A A 1105 A A 1110 A A 1111 A C 1112 A C 1113 A C 1114 A C 1115 A C 1116 A G 1127 A G 1138 A A 1151 A C 1153 A G 1154 A G 1155 A G 1156 A C 1249 A A 1250 A A 1251 A A 1252 A G 1253 A A 1280 A U 1281 A C 1284 A A 1285 A A 1286 A MG 1665 A MG 1777 A MG 1803 A 29 2.63 2.63 237.3 -0.88 -0.74 8.8 81 10 1 4 0 1 1 0  G 661 A G 662 A A 663 A G 664 A A 665 A G 667 A G 668 A U 669 A G 693 A A 716 A C 717 A C 732 A A 733 A G 734 A C 735 A C 736 A A 737 A U 740 A C 805 A C 806 A G 926 A G 928 A G 933 A C 934 A A 935 A C 936 A C 967 A A 968 A C 1063 A U 1065 A A 1111 A C 1112 A C 1114 A C 1115 A C 1116 A G 1127 A G 1138 A A 1151 A C 1153 A G 1154 A G 1155 A G 1156 A A 1183 A G 1184 A G 1185 A G 1186 A G 1187 A C 1249 A A 1250 A A 1251 A A 1252 A G 1253 A A 1280 A U 1281 A C 1284 A A 1285 A A 1286 A A 1340 A U 1341 A C 1342 A G 1343 A C 1344 A C 1382 A C 1383 A C 1384 A A 1503 A A 1507 A G 1525 A G 1526 A C 1527 A G 1530 A A 1531 A A 1534 A C 1539 A U 1540 A MG 1620 A MG 1660 A K 1819 A K 1828 A K 1845 A K 203 I 30 2.31 2.31 235.9 -0.58 -0.78 5.4 76 7 0 1 0 0 1 0  U 118 A A 119 A A 120 A C 121 A G 122 A C 123 A G 124 A U 125 A G 126 A G 127 A G 129 A i:A U 129 A C 131 A C 132 A A 185 A C 186 A C 187 A G 190 A i: F G 190 A i:G G 190 A i:H C 225 A G 226 A G 227 A A 228 A U 229 A G 230 A G 231 A G 232 A C 233 A C 234 A U 239 A C 240 A C 241 A C 242 A A 243 A U 244 A U 252 A U 256 A G 257 A C 267 A C 268 A C 277 A G 281 A A 282 A C 283 A C 312 A A 313 A C 314 A G 319 A C 320 A C 328 A G 668 A U 669 A G 670 A G 671 A U 672 A G 673 A G 674 A A 675 A G 709 A G 710 A G 711 A A 712 A G 713 A G 714 A A 715 A C 732 A A 733 A G 760 A G 761 A C 762 A G 763 A C 764 A G 765 A A 766 A A 767 A C 806 A A 807 A C 808 A G 809 A C 810 A C 811 A C 812 A C 882 A G 895 A C 896 A C 897 A G 903 A C 904 A U 905 A MG 1699 A MG 1730 A MG 1769 A MG 1788 A K 1805 A K 1832 A K 1839 A K 1849 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.