PDBsum entry 2vq1 Go to PDB code:  Tunnel analysis for: 2vq1 calculated with MOLE 2.0 PDB id 2vq1 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   27 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.92 1.92 20.9 -0.69 -0.53 4.0 91 0 1 4 2 2 0 0  GLY 1214 F GLY 1215 F 2 1.95 1.95 23.5 -1.24 -0.76 7.4 90 1 1 3 0 0 1 0  GLY 1214 F 3 1.93 1.93 25.4 -1.15 -0.69 10.3 92 2 2 3 1 1 0 0  GLY 1214 F 4 1.96 1.96 26.3 -1.12 -0.74 6.9 89 0 3 3 0 0 2 0  GLY 1214 F 5 1.95 1.95 31.5 -1.83 -0.87 21.3 93 2 5 3 0 0 0 0  GLY 1214 F 6 1.95 1.95 32.9 -0.54 -0.68 5.2 95 1 1 5 2 0 1 0  GLY 1214 F 7 1.45 1.45 48.6 -0.95 -0.64 12.8 95 2 3 5 2 0 0 0  GLY 1214 F Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.