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PDBsum entry 2vn5
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Cell adhesion
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PDB id
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2vn5
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Generate full PROCHECK analyses
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PROCHECK summary for 2vn5
Ramachandran plot
PROCHECK statistics
1. Ramachandran Plot statistics
No. of
residues %-tage
------ ------
Most favoured regions [A,B,L] 307 89.2%*
Additional allowed regions [a,b,l,p] 33 9.6%
Generously allowed regions [~a,~b,~l,~p] 1 0.3%
Disallowed regions [XX] 3 0.9%*
---- ------
Non-glycine and non-proline residues 344 100.0%
End-residues (excl. Gly and Pro) 12
Glycine residues 34
Proline residues 11
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Total number of residues 401
Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good
quality model would be expected to have over 90% in the most favoured regions [A,B,L].
2. G-Factors
Average
Parameter Score Score
--------- ----- -----
Dihedral angles:-
Phi-psi distribution -0.25
Chi1-chi2 distribution 0.03
Chi1 only 0.14
Chi3 & chi4 0.27
Omega -0.66*
-0.26
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Main-chain covalent forces:-
Main-chain bond lengths 0.39
Main-chain bond angles 0.32
0.35
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OVERALL AVERAGE -0.01
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G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.
Values below -0.5* - unusual
Values below -1.0** - highly unusual
Important note: The main-chain
bond-lengths and bond angles are compared with
the Engh & Huber (1991) ideal values derived
from small-molecule data. Therefore, structures
refined using different restraints may show
apparently large deviations from normality.
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