PDBsum entry 2vb8 Go to PDB code:  Tunnel analysis for: 2vb8 calculated with MOLE 2.0 PDB id 2vb8 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.65 3.37 18.4 -0.78 0.12 17.9 78 3 1 2 3 2 1 0   2 1.64 3.36 18.7 -0.85 -0.02 17.5 80 3 1 2 3 2 0 0   3 1.53 3.62 17.5 -1.29 -0.10 19.4 80 3 1 2 3 2 0 0   4 1.21 1.97 21.4 -0.06 -0.13 8.0 81 2 0 1 4 1 0 0   5 1.21 1.25 21.5 -0.02 -0.29 4.6 81 3 1 1 4 1 0 0   6 1.16 1.94 17.7 -0.15 -0.10 7.5 78 2 0 1 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.