PDBsum entry 2v8t Go to PDB code:  Tunnel analysis for: 2v8t calculated with MOLE 2.0 PDB id 2v8t Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.49 24.8 -0.98 -0.39 18.7 77 4 4 0 5 0 2 0  CL 1307 B 2 1.14 1.50 25.9 -1.25 -0.33 25.3 84 6 3 0 6 0 0 0  MN 1305 B MN 1306 B CL 1307 B CL 1308 B 3 1.12 1.12 27.0 -1.36 -0.50 23.1 84 5 4 0 6 0 0 0  MN 1305 B MN 1306 B CL 1307 B CL 1308 B 4 1.29 1.29 15.6 -1.63 -0.65 19.1 68 1 2 0 0 1 2 0   5 1.16 1.16 15.8 -1.86 -0.72 24.1 75 1 2 0 1 1 1 0   6 1.29 1.29 20.1 -1.67 -0.65 20.0 70 1 2 0 0 1 1 0   7 1.16 1.16 20.2 -1.95 -0.73 25.8 78 1 2 0 1 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.