PDBsum entry 2v5d Go to PDB code:  Pore analysis for: 2v5d calculated with MOLE 2.0 PDB id 2v5d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.20 129.9 -1.19 -0.25 19.1 79 6 8 4 7 3 3 0   2 0.99 0.99 41.7 -0.22 -0.16 11.4 74 2 3 2 5 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.