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PDBsum entry 2v0g
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Pore analysis for: 2v0g calculated with MOLE 2.0 PDB id
2v0g
Pores calculated on whole structure Pores calculated excluding ligands
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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 1.38 31.0 -1.48 -0.83 15.2 80 3 3 1 0 0 0 0  G 1 F C 2 F A 73 F C 74 F C 75 F
2 3.76 4.17 36.0 -0.99 -0.45 20.9 86 3 5 1 4 0 0 0  C 69 B G 70 B G 71 B A 28 F C 47 F i:A
3 3.68 3.68 39.5 -1.37 -0.88 17.4 87 1 4 1 0 0 0 0  G 10 B C 27 B A 28 B C 46 B G 47 B C 47 B i:A G
10 F C 27 F A 28 F C 46 F C 47 F i:A G 47 F
4 1.17 1.82 42.2 -1.73 -0.49 29.0 74 3 4 0 5 2 0 0  SO4 1879 D
5 2.40 2.50 46.2 -0.79 -0.76 8.9 85 0 3 1 1 0 0 0  G 6 B G 7 B G 12 B G 13 B A 14 B A 15 B G 59 B C
61 B C 68 B C 69 B A 28 F C 47 F i:A G 47 F
6 2.60 2.60 48.4 -1.14 -0.60 15.0 85 2 3 1 2 0 0 0  A 28 B C 47 B i:A G 1 F C 2 F C 68 F C 69 F G 70
F A 73 F C 74 F C 75 F
7 3.10 3.31 55.5 -1.16 -0.60 17.4 82 3 4 1 2 1 1 0  G 5 B G 6 B G 7 B A 14 B A 15 B G 59 B C 61 B C
69 B G 70 B G 71 B
8 2.40 2.42 58.4 -1.30 -0.73 15.5 80 4 5 1 1 0 0 0  G 6 B G 12 B G 13 B A 14 B A 15 B G 59 B C 68 B C
69 B A 28 F C 47 F i:A G 47 F
9 1.90 2.01 64.2 -1.31 -0.59 16.5 78 3 4 3 3 1 0 0  SO4 1879 D G 1 F C 2 F A 73 F C 74 F C 75 F
10 1.70 1.70 68.4 -1.76 -0.78 18.6 79 5 5 3 0 1 1 0  G 10 B G 26 B C 27 B A 28 B C 32 B A 38 B U 39 B
C 46 B C 47 B i:A G 47 B
11 1.38 1.39 69.7 -1.33 -0.56 17.6 83 4 6 1 4 0 1 0  C 47 B i:A C 68 F C 69 F G 70 F A 73 F C 74 F
12 3.56 4.11 70.6 -1.23 -0.66 18.7 80 5 7 1 3 0 0 0  U 8 B G 9 B G 10 B G 12 B C 27 B A 28 B C 46 B G
47 B C 47 B i:A C 68 B C 69 B G 70 B G 71 B C 46
F C 47 F i:A A 47 F i:B G 47 F
13 2.39 2.39 72.8 -1.63 -0.82 18.4 83 4 6 2 0 0 1 0  G 10 B C 23 B G 24 B C 25 B G 26 B C 27 B A 28 B
A 31 B A 38 B U 39 B C 40 B A 41 B U 42 B G 43 B
C 46 B C 47 B i:A G 47 B
14 1.60 1.75 73.4 -1.04 -0.49 19.7 82 4 6 4 6 1 0 0  SO4 1886 A G 70 B G 71 B A 73 B
15 1.90 2.01 74.0 -1.21 -0.50 18.8 79 2 7 3 5 1 1 0  C 47 B i:A SO4 1879 D C 68 F C 69 F G 70 F G 71 F
C 72 F A 73 F
16 1.75 1.74 76.0 -1.48 -0.63 19.7 80 6 6 5 2 1 1 0  G 26 B C 27 B C 32 B A 38 B U 39 B G 10 F C 27 F
A 28 F C 46 F C 47 F i:A G 47 F
17 1.33 1.38 79.8 -1.64 -0.57 22.9 82 4 7 3 6 1 2 0  SO4 1886 A C 69 B G 70 B G 71 B A 73 B A 28 F C
47 F i:A G 47 F
18 1.60 1.75 79.6 -0.75 -0.44 16.6 79 2 6 3 6 1 1 0  SO4 1886 A C 69 B G 70 B G 71 B A 73 B A 28 F C
47 F i:A G 47 F
19 1.22 1.39 79.4 -1.58 -0.57 16.1 80 4 6 4 3 2 2 0  G 5 B G 6 B C 69 B G 70 B G 71 B
20 1.21 1.37 86.4 -1.42 -0.67 13.1 79 4 5 4 2 2 2 0  G 5 B G 6 B G 12 B C 68 B C 69 B A 28 F C 47 F i:
A G 47 F
21 2.03 2.24 93.0 -1.92 -0.74 23.3 78 9 9 1 1 0 0 0  A 28 B C 47 B i:A G 6 F G 7 F U 8 F G 12 F G 13 F
A 14 F A 15 F G 59 F C 68 F
22 1.78 1.80 95.2 -1.47 -0.57 19.3 77 8 7 4 3 2 2 0  G 10 B C 11 B G 12 B G 26 B C 27 B C 32 B A 38 B
U 39 B C 68 B C 69 B G 70 B G 71 B
23 2.78 2.78 95.3 -1.08 -0.78 12.2 85 4 4 1 0 0 0 0  G 10 B U 20 B G 21 B A 22 B C 23 B A 31 B C 40 B
A 41 B U 42 B G 43 B U 44 B G 45 B C 46 B C 47 B
i:E G 47 B i:F C 50 B G 51 B G 52 B G 53 B U 55 B
A 58 B G 10 F C 27 F A 28 F C 46 F C 47 F i:A G
47 F C 47 F i:E G 47 F i:F G 52 F
24 1.99 2.17 97.7 -1.97 -0.83 23.2 82 7 12 4 0 0 1 0  G 10 F C 23 F G 24 F C 25 F G 26 F C 27 F A 28 F
A 38 F U 39 F A 41 F U 42 F G 43 F U 44 F C 46 F
C 47 F i:A G 47 F
25 1.38 1.38 114.6 -1.57 -0.71 19.8 84 6 8 2 4 1 0 0  G 47 B A 47 B i:B C 47 B i:A U 8 F G 9 F G 10 F C
11 F G 12 F C 27 F A 28 F C 46 F C 47 F i:A G 47
F C 68 F C 69 F G 70 F A 73 F C 74 F
26 1.51 1.48 121.3 -0.99 -0.74 11.2 82 6 5 1 3 0 0 0  G 6 B G 7 B C 46 B C 47 B i:A A 47 B i:B G 47 B C
47 B i:E G 47 B i:F U 48 B G 49 B C 50 B G 51 B G
52 B G 53 B G 59 B U 60 B C 61 B U 8 F G 9 F G 10
F C 11 F G 12 F G 47 F i:F C 47 F i:E C 50 F G 51
F C 68 F C 69 F G 70 F A 73 F C 74 F
27 1.97 2.08 140.7 -1.41 -0.71 18.5 79 12 12 1 3 0 0 0  U 8 B G 9 B G 10 B G 12 B C 46 B C 47 B i:E G 47
B i:F C 50 B G 51 B G 52 B C 68 B C 69 B G 70 B G
71 B U 20 F G 21 F A 22 F C 23 F G 43 F U 44 F G
45 F C 46 F C 47 F i:A A 47 F i:B G 47 F C 47 F i:
E G 47 F i:F G 52 F A 58 F
28 1.37 1.48 146.3 -1.85 -0.74 22.1 80 13 13 2 3 0 0 0  G 6 F G 7 F U 8 F G 12 F G 13 F A 14 F A 15 F G
59 F C 68 F C 69 F G 70 F A 73 F C 74 F
29 1.42 1.56 154.5 -1.13 -0.74 13.0 82 9 7 1 3 0 0 0  U 20 B G 21 B A 22 B C 23 B A 31 B C 40 B A 41 B
U 42 B G 43 B U 44 B G 45 B C 46 B C 47 B i:A A
47 B i:B G 47 B C 47 B i:E G 47 B i:F G 52 B G 53
B U 55 B A 58 B U 8 F G 9 F G 10 F C 11 F G 12 F
G 47 F i:F C 47 F i:E C 50 F G 51 F G 52 F C 68 F
C 69 F G 70 F A 73 F C 74 F
30 1.44 1.46 154.7 -1.58 -0.73 18.5 80 12 11 2 3 0 0 0  G 6 B U 8 B G 9 B G 10 B G 12 B G 13 B A 14 B A
15 B C 46 B C 47 B i:A A 47 B i:B G 47 B G 59 B C
68 B U 8 F G 9 F G 10 F C 11 F G 12 F C 46 F G 47
F A 47 F i:B C 47 F i:A C 68 F C 69 F G 70 F A 73
F C 74 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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