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PDBsum entry 2ux4

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Pore analysis for: 2ux4 calculated with MOLE 2.0 PDB id
2ux4
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.70 2.08 26.2 -1.07 0.53 6.5 61 1 1 2 2 5 1 0  BCL 1282 L LDA 1305 M GOL 1315 M
2 2.96 3.38 29.7 2.49 1.33 0.7 76 0 0 0 5 4 0 0  BCL 1282 L LDA 1283 L BPH 1286 L BCL 1288 L LDA
1308 M U10 1312 M
3 1.30 1.35 30.5 -0.69 -0.19 22.2 80 1 5 1 5 1 3 0  UQ2 1287 L
4 2.99 5.58 45.6 1.44 0.92 8.3 70 4 0 1 10 9 0 0  LDA 1284 L LDA 1285 L UQ2 1287 L BCL 1288 L BCL
1303 M BCL 1304 M BPH 1311 M SPO 1313 M LDA 1709 M
5 2.05 2.06 47.7 1.06 0.74 3.1 67 1 0 1 8 7 0 0  BCL 1303 M BCL 1304 M BPH 1311 M SPO 1313 M
6 1.63 1.72 60.3 1.67 0.99 3.3 64 1 0 1 9 10 0 0  LDA 1284 L LDA 1285 L UQ2 1287 L BCL 1303 M BCL
1304 M LDA 1309 M BPH 1311 M SPO 1313 M LDA 1709 M
7 1.60 2.36 63.4 0.71 0.83 12.4 71 4 0 2 6 9 0 0  LDA 1285 L BCL 1288 L BCL 1303 M BCL 1304 M LDA
1309 M

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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