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PDBsum entry 2uuj

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2uuj calculated with MOLE 2.0 PDB id
2uuj
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 1.48 22.2 -1.73 -0.75 22.0 85 3 5 1 0 2 1 0  NA 1248 B
2 1.32 1.53 23.5 -1.10 -0.59 15.5 74 2 4 1 0 2 0 1  896 1250 B
3 1.32 1.53 26.1 -0.78 -0.31 9.9 72 1 3 2 1 4 0 1  896 1250 B
4 1.37 1.47 22.1 0.01 0.06 9.9 80 2 1 1 6 3 0 0  
5 1.36 1.47 23.6 0.08 -0.03 8.9 82 2 1 1 6 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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