PDBsum entry 2sgd Go to PDB code:  Tunnel analysis for: 2sgd calculated with MOLE 2.0 PDB id 2sgd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.50 15.6 -0.71 -0.73 5.2 85 0 2 3 0 0 0 2  K 501 E 2 1.28 1.46 20.3 -1.23 -0.69 10.1 82 1 2 2 1 1 0 1  K 501 E 3 1.31 1.50 21.0 -1.43 -0.74 10.9 85 1 3 3 0 0 1 1  K 501 E Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.