PDBsum entry 2ron

Tunnel analysis for: 2ron calculated with

MOLE 2.0

PDB id

2ron

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

6 tunnels, coloured by tunnel radius

6 tunnels, coloured by tunnel radius

6 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.14

1.32

21.3

0.18

0.28

23.6

81

2

4

1

5

1

0

0

2

1.44

2.43

23.5

-0.38

0.22

19.7

76

3

2

1

4

3

1

0

3

1.37

2.46

24.0

-0.61

0.19

15.6

76

2

2

3

2

3

1

0

4

1.20

1.60

26.1

-0.41

-0.22

13.2

80

2

3

2

4

1

2

0

5

1.28

1.37

28.9

-1.05

-0.06

22.0

76

4

2

1

3

3

0

0

6

1.24

1.34

31.6

-1.13

-0.11

22.2

76

3

2

1

3

3

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.