 |
PDBsum entry 2rc5
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2rc5 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2rc5
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
25 pores,
coloured by radius |
|
30 pores,
coloured by radius
|
30 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
3.20 |
5.50 |
27.0 |
-1.06 |
-0.08 |
25.3 |
77 |
|
3 |
2 |
0 |
2 |
2 |
0 |
0 |
|
FAD 415 B FAD 415 C
|
 |
|
2 |
 |
1.39 |
1.67 |
33.4 |
-1.90 |
-0.37 |
25.0 |
76 |
4 |
5 |
1 |
2 |
3 |
1 |
0 |
|
|
3 |
 |
1.90 |
2.08 |
33.6 |
-0.98 |
-0.23 |
20.0 |
85 |
3 |
4 |
2 |
4 |
1 |
1 |
0 |
FAD 415 C
|
|
4 |
 |
1.86 |
2.69 |
34.0 |
-1.00 |
-0.20 |
19.3 |
77 |
4 |
2 |
2 |
3 |
1 |
1 |
0 |
SO4 315 D
|
|
5 |
 |
3.02 |
3.28 |
37.2 |
-1.80 |
-0.51 |
18.9 |
87 |
3 |
6 |
7 |
2 |
2 |
0 |
0 |
FAD 415 C
|
|
6 |
 |
2.44 |
4.11 |
40.4 |
-2.77 |
-0.65 |
32.0 |
83 |
6 |
7 |
6 |
1 |
1 |
0 |
0 |
|
|
7 |
 |
2.67 |
2.78 |
40.8 |
-1.07 |
-0.11 |
17.5 |
77 |
4 |
6 |
2 |
3 |
3 |
2 |
0 |
FAD 415 C
|
|
8 |
 |
2.24 |
2.24 |
42.2 |
-1.40 |
-0.21 |
23.1 |
76 |
5 |
6 |
1 |
4 |
3 |
2 |
0 |
FAD 415 C
|
|
9 |
 |
2.68 |
5.03 |
43.1 |
-1.74 |
-0.38 |
24.5 |
81 |
7 |
6 |
1 |
2 |
1 |
1 |
0 |
FAD 415 C
|
|
10 |
 |
1.45 |
1.71 |
44.5 |
-0.88 |
-0.27 |
12.4 |
80 |
5 |
4 |
4 |
5 |
2 |
3 |
0 |
SO4 315 B
|
|
11 |
 |
1.91 |
2.08 |
45.4 |
-0.87 |
-0.26 |
18.9 |
83 |
5 |
4 |
3 |
3 |
2 |
1 |
0 |
FAD 415 B FAD 415 C
|
|
12 |
|
3.09 |
3.19 |
46.1 |
-1.88 |
-0.36 |
30.4 |
76 |
6 |
6 |
0 |
2 |
2 |
1 |
0 |
FAD 415 C
|
|
13 |
|
1.40 |
1.68 |
51.5 |
-1.78 |
-0.29 |
24.3 |
79 |
6 |
7 |
1 |
4 |
3 |
2 |
0 |
FAD 415 C
|
|
14 |
|
3.05 |
3.79 |
51.5 |
-1.53 |
-0.19 |
26.9 |
78 |
5 |
5 |
2 |
3 |
4 |
1 |
0 |
FAD 415 B FAD 415 C
|
|
15 |
|
2.68 |
2.79 |
53.5 |
-1.08 |
-0.17 |
17.5 |
77 |
6 |
6 |
3 |
3 |
4 |
2 |
0 |
FAD 415 B FAD 415 C
|
|
16 |
|
2.31 |
2.33 |
55.0 |
-1.35 |
-0.26 |
22.1 |
76 |
7 |
6 |
2 |
4 |
4 |
2 |
0 |
FAD 415 B FAD 415 C
|
|
17 |
|
3.03 |
3.28 |
56.7 |
-2.32 |
-0.76 |
24.0 |
83 |
7 |
9 |
7 |
1 |
2 |
0 |
0 |
|
|
18 |
|
2.74 |
2.76 |
56.7 |
-2.08 |
-0.48 |
27.1 |
82 |
7 |
4 |
3 |
3 |
2 |
1 |
0 |
|
|
19 |
|
2.68 |
4.19 |
59.4 |
-2.50 |
-0.58 |
31.8 |
77 |
7 |
8 |
1 |
1 |
3 |
1 |
0 |
|
|
20 |
|
1.41 |
1.49 |
59.8 |
-1.97 |
-0.31 |
26.7 |
78 |
8 |
9 |
2 |
5 |
4 |
1 |
0 |
|
|
21 |
|
2.66 |
2.97 |
62.5 |
-1.66 |
-0.36 |
26.3 |
77 |
7 |
6 |
1 |
3 |
2 |
1 |
0 |
FAD 415 C
|
|
22 |
|
2.68 |
5.01 |
64.6 |
-2.39 |
-0.68 |
25.0 |
84 |
7 |
10 |
8 |
1 |
2 |
1 |
0 |
|
|
23 |
|
3.04 |
3.83 |
65.4 |
-1.89 |
-0.33 |
27.8 |
76 |
10 |
6 |
2 |
3 |
3 |
1 |
0 |
FAD 415 B
|
|
24 |
|
2.70 |
2.81 |
67.0 |
-1.95 |
-0.52 |
22.4 |
81 |
7 |
7 |
3 |
1 |
3 |
1 |
0 |
|
|
25 |
|
2.41 |
2.33 |
68.4 |
-2.21 |
-0.57 |
26.6 |
79 |
8 |
7 |
2 |
2 |
3 |
1 |
0 |
|
|
26 |
|
2.74 |
2.76 |
67.8 |
-1.32 |
-0.35 |
23.7 |
83 |
4 |
5 |
2 |
4 |
3 |
2 |
0 |
FAD 415 B FAD 415 C
|
|
27 |
|
2.68 |
2.79 |
68.0 |
-2.08 |
-0.41 |
25.4 |
79 |
9 |
8 |
4 |
2 |
4 |
2 |
0 |
|
|
28 |
|
2.06 |
2.06 |
72.4 |
-2.11 |
-0.66 |
22.9 |
88 |
5 |
7 |
8 |
2 |
1 |
1 |
0 |
|
|
29 |
|
2.56 |
4.19 |
77.5 |
-2.39 |
-0.60 |
27.2 |
80 |
9 |
8 |
3 |
1 |
3 |
1 |
0 |
|
 |
30 |
|
1.29 |
2.04 |
92.7 |
-2.28 |
-0.52 |
29.1 |
80 |
12 |
12 |
6 |
4 |
4 |
2 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program