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PDBsum entry 2qpf
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Tunnel analysis for: 2qpf calculated with  MOLE 2.0
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PDB id
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2qpf
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.19 |
2.68 |
32.4 |
0.64 |
-0.10 |
7.0 |
90 |
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1 |
2 |
6 |
9 |
0 |
0 |
0 |
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2 |
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1.16 |
3.39 |
36.4 |
0.50 |
-0.06 |
8.6 |
90 |
2 |
1 |
8 |
8 |
0 |
1 |
0 |
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3 |
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1.13 |
1.91 |
21.3 |
-1.20 |
0.18 |
20.7 |
66 |
3 |
2 |
0 |
1 |
5 |
0 |
0 |
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4 |
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1.17 |
1.86 |
20.9 |
1.55 |
0.11 |
0.9 |
93 |
0 |
0 |
4 |
5 |
0 |
0 |
0 |
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5 |
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1.21 |
2.44 |
22.9 |
-0.14 |
-0.09 |
16.3 |
90 |
2 |
1 |
2 |
6 |
0 |
0 |
0 |
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6 |
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1.22 |
2.57 |
19.9 |
-1.25 |
-0.08 |
24.4 |
72 |
5 |
3 |
0 |
1 |
3 |
0 |
0 |
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7 |
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1.19 |
2.54 |
23.0 |
-0.91 |
0.10 |
18.3 |
75 |
2 |
2 |
2 |
1 |
4 |
0 |
0 |
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8 |
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1.24 |
2.76 |
16.9 |
-1.21 |
-0.57 |
16.1 |
83 |
2 |
0 |
1 |
1 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program