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PDBsum entry 2qhs
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References listed in PDB file
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Key reference
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Title
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Structural basis of octanoic acid recognition by lipoate-Protein ligase b.
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Authors
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D.O. .J.Kim,
S.J.Lee,
H.S.Kim,
K.H.Kim,
H.H.Lee,
H.J.Yoon,
S.W.Suh.
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Ref.
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Proteins, 2008,
70,
1620-1625.
[DOI no: ]
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PubMed id
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Abstract
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No abstract given.
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Figure 1.
Figure 1. Overall fold and topology diagram of Tth LipB. (A)
F[o] - F[c] electron density maps of the bound ligands contoured
at 1.8  .
Atoms of the ligands are also labeled. All the figures are drawn
with PyMOL (DeLano, 2002, The PyMOL Molecular Graphics System,
http://www.pymol.org/). (B) Ribbon diagram. Secondary structure
elements were assigned by PROMOTIF.[19]  -Helices,
 -strands,
and loops are colored in cyan, yellow, and pink, respectively.
Octanoic acid bound near the center of LipB is shown in sticks.
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Figure 2.
Figure 2. Octanoic acid binding to Tth LipB. (A) Stereo view of
the active site around the bound octanoic acid. Black dotted
lines denote hydrogen bonds (B) Ribbon diagram of the crystal
structure of Mtu LipB[11] and the homology model of E. coli
LipB. -Helices,
-strands,
and loops are colored in cyan, yellow, and pink, respectively.
Decanoic acid and octanoic acid bound to each of the two
proteins are shown in sticks.
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The above figures are
reprinted
by permission from John Wiley & Sons, Inc.:
Proteins
(2008,
70,
1620-1625)
copyright 2008.
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