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PDBsum entry 2qb7

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2qb7 calculated with MOLE 2.0 PDB id
2qb7
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.45 32.7 0.00 -0.42 6.2 89 2 1 3 6 0 1 0  
2 2.08 2.26 36.7 -1.05 -0.20 17.5 77 4 2 4 2 2 0 0  EDO 905 B
3 1.58 2.68 39.0 0.99 0.48 9.2 79 3 1 4 12 1 1 0  EDO 904 A
4 1.16 1.41 39.3 -0.38 -0.35 15.4 81 3 4 4 5 0 1 0  
5 1.17 1.39 39.3 0.06 -0.33 11.9 86 3 3 2 7 0 0 0  
6 3.30 3.45 44.9 -2.51 -0.56 34.4 80 8 5 1 2 0 0 0  
7 2.94 3.05 45.9 -2.27 -0.53 34.8 83 7 5 2 2 0 0 0  
8 1.41 1.59 84.7 -1.10 -0.27 21.0 76 8 6 4 3 4 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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