PDBsum entry 2q1f Go to PDB code:  Pore analysis for: 2q1f calculated with MOLE 2.0 PDB id 2q1f Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 1.30 31.8 0.73 0.12 5.7 88 2 0 2 6 3 0 0  MSE 227 B MSE 472 B 2 1.04 4.02 38.3 -1.40 0.06 18.7 74 6 3 1 2 5 0 0  MSE 702 B MSE 951 B PO4 2006 B PO4 2008 B PO4 2010 B 3 1.24 1.47 42.6 -0.77 0.12 18.9 85 5 2 1 6 2 0 0  MSE 318 B MSE 360 B 4 1.84 2.30 69.9 -1.43 -0.46 18.5 85 7 5 3 2 2 2 0   5 1.09 1.36 100.6 -1.83 -0.49 26.0 82 5 6 0 3 0 2 0   6 1.29 1.44 161.2 -2.07 -0.38 28.2 75 12 10 3 6 4 2 0  MSE 413 B MSE 414 B PO4 2003 B 7 1.27 1.32 41.1 0.56 0.14 6.4 85 3 1 2 9 4 0 0  MSE 227 A MSE 472 A 8 1.12 2.42 55.8 -0.23 0.02 10.0 83 5 3 4 8 2 2 0  MSE 227 A MSE 525 A MSE 568 A 9 1.16 2.38 72.6 0.00 -0.05 8.8 86 5 2 5 11 4 2 0  MSE 227 A MSE 472 A MSE 568 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.