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PDBsum entry 2q1f

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2q1f calculated with MOLE 2.0 PDB id
2q1f
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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11 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.56 22.0 -0.63 0.14 12.3 72 2 1 0 3 2 0 0  MSE 702 A MSE 951 A
2 1.17 2.07 27.4 1.11 0.30 5.3 87 1 1 4 7 2 0 0  MSE 748 B MSE 915 B
3 1.25 1.25 26.7 -0.47 -0.56 8.3 87 1 1 5 4 1 1 0  
4 1.24 1.24 31.8 -0.65 -0.40 10.9 77 2 1 3 5 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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