PDBsum entry 2q0a Go to PDB code:  Tunnel analysis for: 2q0a calculated with MOLE 2.0 PDB id 2q0a Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.86 15.4 0.67 0.15 10.9 87 2 1 0 6 0 0 1  PCG 401 A 2 1.67 2.29 15.9 0.17 0.00 13.4 90 3 1 0 6 0 0 1  PCG 401 A 3 1.62 2.21 16.9 0.11 -0.01 13.6 90 3 1 0 6 0 0 1  PCG 401 A 4 2.03 2.35 20.0 0.51 0.28 14.1 84 3 1 0 7 1 0 1  PCG 401 A 5 1.65 1.92 21.0 0.57 0.23 12.6 84 3 1 0 7 1 0 1  PCG 401 A 6 1.06 2.48 16.0 0.63 0.06 10.2 87 2 1 0 6 1 0 0  PCG 402 B 7 1.76 3.29 17.1 0.78 0.24 10.6 91 3 0 0 7 0 0 0  PCG 402 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.