PDBsum entry 2pym Go to PDB code:  Tunnel analysis for: 2pym calculated with MOLE 2.0 PDB id 2pym Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.07 3.31 15.2 0.84 0.14 9.6 91 1 1 0 5 0 1 0  1UN 1001 A 2 1.98 2.89 15.4 0.77 0.08 8.1 93 1 1 1 6 0 1 0  1UN 1001 A 3 1.38 1.38 15.6 -0.55 -0.40 16.2 85 1 2 0 2 0 1 0  1UN 1001 A 4 1.40 1.40 15.8 -0.17 -0.30 13.2 85 1 2 0 2 0 1 0  1UN 1001 A 5 1.41 1.41 17.7 -1.44 -0.73 19.4 90 2 3 1 2 0 0 0  1UN 1001 A 6 1.38 1.38 18.5 -0.19 -0.29 11.9 94 1 3 1 4 0 0 0  1UN 1001 A 7 2.05 3.29 21.8 0.23 -0.13 11.1 96 1 3 1 8 0 0 0  1UN 1001 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.