PDBsum entry 2pxt Go to PDB code:  Tunnel analysis for: 2pxt calculated with MOLE 2.0 PDB id 2pxt Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.28 16.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 138 B U 139 B C 141 B A 164 B G 165 B C 166 B C 167 B A 168 B 2 1.32 1.32 17.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 139 B C 141 B C 142 B A 143 B G 144 B A 164 B G 165 B C 166 B C 167 B A 168 B A 169 B G 170 B 3 1.74 1.74 18.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  C 141 B C 142 B A 143 B G 144 B G 145 B U 146 B C 163 B A 164 B G 165 B A 169 B G 170 B NCO 202 B 4 1.75 1.75 20.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 143 B G 145 B U 146 B C 147 B A 161 B G 162 B C 163 B A 164 B G 165 B NCO 202 B 5 1.21 1.21 21.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 139 B C 141 B C 142 B A 164 B G 165 B C 166 B C 167 B A 168 B A 169 B G 170 B G 171 B 6 1.23 1.23 24.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  C 141 B A 143 B G 144 B G 145 B U 146 B C 147 B A 161 B G 162 B C 163 B A 164 B G 165 B C 166 B NCO 202 B 7 1.75 1.75 24.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  U 138 B U 139 B C 141 B G 144 B G 145 B U 146 B C 163 B A 164 B G 165 B C 166 B C 167 B A 168 B NCO 202 B 8 1.30 1.30 25.1 -1.05 -0.73 11.0 87 2 0 0 0 0 0 0  U 139 B A 140 B C 141 B A 164 B G 165 B C 166 B C 167 B A 168 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.