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PDBsum entry 2px0

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2px0 calculated with MOLE 2.0 PDB id
2px0
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.48 3.52 28.6 -3.01 -0.96 34.6 81 4 5 4 0 0 0 0  
2 1.84 2.40 37.8 -2.24 -0.70 17.9 89 3 3 4 1 1 0 0  GNP 3 C GNP 7 G
3 1.60 1.92 37.8 -0.87 -0.10 21.2 75 3 3 2 3 2 0 0  
4 1.67 1.89 40.3 -1.17 -0.25 24.0 83 4 5 4 4 1 0 0  
5 1.51 1.60 71.8 -1.36 -0.30 19.4 82 5 7 3 4 2 0 0  
6 1.14 1.21 92.1 -1.11 -0.34 20.9 80 7 9 4 5 3 0 0  
7 1.27 2.31 118.4 -1.15 -0.33 19.7 85 8 11 5 8 2 1 0  
8 1.18 2.30 129.3 0.02 0.12 14.9 74 8 7 3 13 6 2 0  
9 1.22 1.59 127.4 -2.16 -0.50 27.1 82 7 9 6 4 3 0 0  
10 1.21 1.21 229.5 -1.88 -0.49 26.1 79 13 16 10 9 3 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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