PDBsum entry 2prx Go to PDB code:  Tunnel analysis for: 2prx calculated with MOLE 2.0 PDB id 2prx Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.94 2.10 17.0 0.78 0.22 2.4 78 1 0 0 3 2 2 0   2 1.33 1.33 19.5 -0.14 -0.42 6.1 82 0 1 1 1 1 0 1   3 1.63 2.15 23.7 -0.29 -0.24 12.5 88 3 1 0 3 1 0 0  MSE 150 B 4 1.38 1.38 33.0 -0.15 -0.21 4.7 79 0 1 3 2 3 0 1   5 1.66 2.12 37.0 -0.72 -0.30 10.0 79 1 1 1 2 2 1 1   6 1.83 2.02 19.4 -0.54 -0.29 13.5 77 1 1 0 2 2 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.