PDBsum entry 2pnr Go to PDB code:  Tunnel analysis for: 2pnr calculated with MOLE 2.0 PDB id 2pnr Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.11 1.44 37.9 -0.52 -0.10 6.6 81 3 1 5 5 3 3 0   2 1.27 2.18 114.1 -1.01 0.00 18.8 78 11 5 7 15 8 2 0   3 1.23 1.23 21.8 -0.16 -0.16 11.9 86 3 2 2 7 0 0 0   4 1.24 1.86 25.0 -0.65 -0.22 24.3 85 2 3 0 5 0 0 0   5 1.14 2.17 26.2 -1.65 0.27 25.9 69 4 0 1 1 4 0 0   6 1.23 1.47 17.7 0.84 0.09 2.0 78 0 0 2 6 1 0 1   7 1.09 1.75 22.1 1.89 0.62 4.8 69 2 0 0 9 1 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.