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PDBsum entry 2pjq
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Tunnel analysis for: 2pjq calculated with  MOLE 2.0
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PDB id
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2pjq
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.08 |
1.28 |
37.7 |
-0.71 |
-0.30 |
12.8 |
80 |
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3 |
2 |
4 |
7 |
1 |
0 |
0 |
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MSE 100 D
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2 |
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1.08 |
1.30 |
50.5 |
-1.62 |
-0.29 |
25.5 |
78 |
7 |
3 |
2 |
7 |
3 |
0 |
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MSE 100 D
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3 |
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1.12 |
1.40 |
56.8 |
-1.72 |
-0.42 |
26.4 |
79 |
7 |
4 |
4 |
6 |
3 |
0 |
0 |
MSE 100 D
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4 |
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1.11 |
1.38 |
61.8 |
-2.12 |
-0.40 |
27.0 |
82 |
12 |
5 |
5 |
5 |
2 |
1 |
0 |
MSE 100 D
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5 |
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1.30 |
1.41 |
17.3 |
0.39 |
0.13 |
4.5 |
87 |
0 |
1 |
3 |
4 |
1 |
0 |
0 |
MSE 1 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program